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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88317.1
DDBJ      :             MFS permease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  32/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:401 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  9->194 1pv6A  f.38.1.2 * 6e-08 18.7 %
:HMM:SCOP  1->402 1pv7A_ f.38.1.2 * 1.2e-28 21.2 %
:RPS:PFM   5->101 PF07690 * MFS_1 8e-04 27.8 %
:HMM:PFM   19->234 PF07690 * MFS_1 4.4e-12 22.7 207/353  
:HMM:PFM   249->391 PF07690 * MFS_1 3.4e-07 21.1 142/353  
:BLT:SWISS 19->197 SETA_ECOLI 7e-12 24.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88317.1 GT:GENE AAK88317.1 GT:PRODUCT MFS permease GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2571679..2572884) GB:FROM 2571679 GB:TO 2572884 GB:DIRECTION - GB:PRODUCT MFS permease GB:PROTEIN_ID AAK88317.1 GB:DB_XREF GI:15157791 LENGTH 401 SQ:AASEQ MPSALSIVINNPSIRIGALAILFFGFSNAATAPYQAVIGIREIGLSNSVYSLLMLFAAVINVSASVLMGIVADRLGEYRKPMLLIALFGVSGYMLVYLVGNATAFVSAKLILLPIFGAMNSLIFAHVRADARNLSTGDMIAVNSIMRATISLSWVLVPGIVGIFLVNSGNMLLAFLFSGVCALICFLLVAFCLPRAATPAVVNNEARFGLMASLAEIGSRRVLLRIIAIALICSMLHLNDSIRSLIITGQAKGTVADIGIVAGIVAALEIVFILLWGWIEKKVPQTLTLAAGAVLYAIYLILQGLASAPWHIYAQTVISALGAAAIISIPITYLQELIADRPGLGSSLIAVNIFLGAGLGALIFAVGTLVSSYSGTSILGAIVGLGGVYMLYTLDGTGRRR GT:EXON 1|1-401:0| BL:SWS:NREP 1 BL:SWS:REP 19->197|SETA_ECOLI|7e-12|24.3|177/392| TM:NTM 12 TM:REGION 12->34| TM:REGION 52->74| TM:REGION 81->103| TM:REGION 108->130| TM:REGION 140->162| TM:REGION 174->196| TM:REGION 222->244| TM:REGION 256->278| TM:REGION 285->307| TM:REGION 316->338| TM:REGION 348->370| TM:REGION 375->396| SEG 220->232|rrvllriiaiali| SEG 253->271|gtvadigivagivaaleiv| SEG 318->331|isalgaaaiisipi| RP:PFM:NREP 1 RP:PFM:REP 5->101|PF07690|8e-04|27.8|97/347|MFS_1| HM:PFM:NREP 2 HM:PFM:REP 19->234|PF07690|4.4e-12|22.7|207/353|MFS_1| HM:PFM:REP 249->391|PF07690|3.4e-07|21.1|142/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 9->194|1pv6A|6e-08|18.7|182/417|f.38.1.2| HM:SCP:REP 1->402|1pv7A_|1.2e-28|21.2|391/417|f.38.1.2|1/1|MFS general substrate transporter| OP:NHOMO 37 OP:NHOMOORG 32 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111122-22211------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---111---1---11--1-1---1-1---111111------------------------1---11-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 209-215, 398-401| PSIPRED cccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc //