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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88377.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  70/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.18a.118.8
:538 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   248->338 3cv0A PDBj 2e-04 21.6 %
:RPS:SCOP  134->338 1w3bA  a.118.8.1 * 2e-04 15.4 %
:HMM:SCOP  119->367 1ouvA_ a.118.18.1 * 4.8e-08 23.5 %
:HMM:PFM   1->135 PF07219 * HemY_N 2.7e-44 39.1 133/134  
:HMM:PFM   330->361 PF07719 * TPR_2 0.00035 21.9 32/34  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88377.2 GT:GENE AAK88377.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2638879..2640495 GB:FROM 2638879 GB:TO 2640495 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88377.2 GB:DB_XREF GI:159140568 LENGTH 538 SQ:AASEQ MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWWVVNAVWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEPLIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAYEAAQQYAEDAAEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEKLESDPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIAQLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIEPRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVADGIVSEKWLPVSPVTGRLDAFEWKAPFGQLEGPVEDLTIENAIAAAPARAEPAVKTIIVEAAPETRAEPKPAPATPIEVKPIVSTAKENKPVPIEAPVGTDASDKKADAVPFFGGAPDDPGVKKSGAEAEPKTRLKLF GT:EXON 1|1-538:0| TM:NTM 2 TM:REGION 1->23| TM:REGION 43->65| SEG 39->58|mslmvaasiiaalvaavmli| SEG 71->83|aarryfrarkrdr| SEG 91->103|gliaagagnaila| SEG 163->184|earrqgayeaaqqyaedaaeka| SEG 342->362|akefakarakaeaaariepre| SEG 439->453|ienaiaaaparaepa| RP:PDB:NREP 1 RP:PDB:REP 248->338|3cv0A|2e-04|21.6|88/300| HM:PFM:NREP 2 HM:PFM:REP 1->135|PF07219|2.7e-44|39.1|133/134|HemY_N| HM:PFM:REP 330->361|PF07719|0.00035|21.9|32/34|TPR_2| RP:SCP:NREP 1 RP:SCP:REP 134->338|1w3bA|2e-04|15.4|195/388|a.118.8.1| HM:SCP:REP 119->367|1ouvA_|4.8e-08|23.5|243/0|a.118.18.1|1/1|HCP-like| OP:NHOMO 70 OP:NHOMOORG 70 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111111111111111111111111-11111111111111111111111111-111111111111-------------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 130 STR:RPRED 24.2 SQ:SECSTR #######################################################################################################################################################################################################cTTcccccccccHH###HHHHHHHHHHHHHHHHHTTcccHHHH#####TTTTcccccccGGGGcccHHHHHHHHHHTTcHHHHHHHHHHHHHHcTHHHHHHHHHHTTcHHHHHHHHHHH##HH#HcTTcHHHHHHHHHHcc###################################################################################################################################################################################################### DISOP:02AL 75-86,423-532| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //