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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88395.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:RLMN_AGRT5   RecName: Full=Ribosomal RNA large subunit methyltransferase N;         EC=2.1.1.-;AltName: Full=23S rRNA m2A2503 methyltransferase;

Homologs  Archaea  1/68 : Bacteria  795/915 : Eukaryota  39/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:390 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   33->363 2a5hA PDBj 2e-29 12.5 %
:HMM:SCOP  110->349 1r30A_ c.1.28.1 * 1.5e-08 23.9 %
:RPS:PFM   121->267 PF04055 * Radical_SAM 6e-09 39.2 %
:HMM:PFM   117->295 PF04055 * Radical_SAM 1.6e-14 25.3 150/166  
:BLT:SWISS 1->390 RLMN_AGRT5 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88395.2 GT:GENE AAK88395.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2657288..2658460) GB:FROM 2657288 GB:TO 2658460 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88395.2 GB:DB_XREF GI:159140577 LENGTH 390 SQ:AASEQ MSGKPSLIGLTREEMGEALAEIGVPQKQVKMRVSQLWNWLYVRGVSDFDNMTNVAKELREKLKAAFTIARPEIVEEQISNDGTRKWLMRFPPRGAGRPVEIETVYIPEEGRGTLCISSQVGCSLTCSFCHTGTQRLVRNLTAEEILSQLLLARDRLGDFPDGSTPVGAYVPSEGRKVSNIVMMGMGEPLYNFEHVKTALLIATDGDGLSLSKRRVTLSTSGVVPEIFRTGDEIGVMLAISLHAVRDDLRDMLVPINKKYPLKELIEACRNYPGVSNARRITFEYVMLKDVNDSLEDAKMLVQLLKGVPAKINLIPFNPWPGTNYQCSEWAQIEKFADFINQAGYASPIRTPRGRDILAACGQLKSESERMRKTERLAFEAMMIANHGADD GT:EXON 1|1-390:0| SW:ID RLMN_AGRT5 SW:DE RecName: Full=Ribosomal RNA large subunit methyltransferase N; EC=2.1.1.-;AltName: Full=23S rRNA m2A2503 methyltransferase; SW:GN Name=rlmN; OrderedLocusNames=Atu2673; ORFNames=AGR_C_4846; SW:KW 4Fe-4S; Complete proteome; Cytoplasm; Iron; Iron-sulfur;Metal-binding; Methyltransferase; rRNA processing;S-adenosyl-L-methionine; Transferase. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->390|RLMN_AGRT5|0.0|100.0|390/409| GO:SWS:NREP 7 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0008168|"GO:methyltransferase activity"|Methyltransferase| GO:SWS GO:0006364|"GO:rRNA processing"|rRNA processing| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| RP:PDB:NREP 1 RP:PDB:REP 33->363|2a5hA|2e-29|12.5|296/400| RP:PFM:NREP 1 RP:PFM:REP 121->267|PF04055|6e-09|39.2|120/164|Radical_SAM| HM:PFM:NREP 1 HM:PFM:REP 117->295|PF04055|1.6e-14|25.3|150/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| HM:SCP:REP 110->349|1r30A_|1.5e-08|23.9|205/312|c.1.28.1|1/1|Radical SAM enzymes| OP:NHOMO 977 OP:NHOMOORG 835 OP:PATTERN -------------------------------------------------------------------1 111111111111111-111-11--1121121111111111111111111------11---1111111111111111111111121222111111111--11111111111--------------21111111111111111---11111111111111111111111111111111111111111111111112111111111111111211111111111111211111122111111111111111111111----------------------1111111111111111111111111111111111111121111111111111222222212111111111211111111111111111111111-11112111111111111111111121111111111111-1111111111111111111111111111111111111111111111111111111------------------------------111112111111111111111111111111111111111111122111111121111211121111111111122211211111111111111111111122223311111111111111111111111111111111111111111111111111111112111--1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111-111111111111111112111111111-111111111111112122221111211112111111111111111111111111111111111111211111111111111--------111------------------1---1111111111111131 1111111-1---112----------------------------------------------------------------------------------------111--A1-----------------------------------------------------------------1544Q444334366-424411115 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 379 STR:RPRED 97.2 SQ:SECSTR ##ccHHHHHHHHHHHHHHHHTTEEEEEEEEccHHTcHHHHHcccHHHHHTTccccHHHHHHHHTcccccccHHHHTTccTTcTTcHHHHHccTTccccTTcTTTccccTTEcccEEEEEEEcccccTTcTTTTTTTccccccHHHHHHHHHHHTcTTHTTccTTcHHHHHEEEcTTccEEEEEEccTTcccHHHHHHHHHHHHTcTEEEEEccHHHHcGGGccHHHHHHGGGccEEEEEccccGGGccHHHHHHHHHHHHHHHHHHTTcTTcEccHHHcEEEEEEccTTTTccHHHHHHHHHHHHTTEEEEEEEcccccTTcGGGcccHHHHHHHHHTTcTTcccGGGccEEEEEETTTTEEEHHHHHHHHHHHHHHHHHT######### DISOP:02AL 1-2,365-383,385-391| PSIPRED cccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHccccccccEEEEEEcccccEEEEEEEcccccccccEEEEEEEEEcccEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEccccHHccHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHccccEEEEEccccHHHHHHHccccccccHHHHHHHHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //