[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88405.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  93/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:221 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->221 2axoA PDBj e-105 99.0 %
:RPS:PDB   2->221 2axoA PDBj 2e-18 76.0 %
:RPS:SCOP  2->221 2axoA1  c.47.1.19 * 7e-15 86.9 %
:HMM:SCOP  2->221 2axoA1 c.47.1.19 * 3.3e-68 41.4 %
:RPS:PFM   4->183 PF06764 * DUF1223 3e-40 44.4 %
:HMM:PFM   4->198 PF06764 * DUF1223 1.5e-64 40.5 195/203  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88405.2 GT:GENE AAK88405.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2667298..2667963) GB:FROM 2667298 GB:TO 2667963 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88405.2 GB:DB_XREF GI:159140582 LENGTH 221 SQ:AASEQ MKGVVELFTSQGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAILNGRDHVKGADVRGIYDRLDAFKREGQGLNVPVSSKFAGDEVEIDIGAGNGKADVVVAYFTREQTVDVQKGENQGKKMSYWHSVYDVQTVGMWDGSPMTVKLPASVVAKVKKGGCAVLLQTANASGDPAAIVGASILLGNETQ GT:EXON 1|1-221:0| SEG 184->195|vvakvkkggcav| BL:PDB:NREP 1 BL:PDB:REP 1->221|2axoA|e-105|99.0|209/217| RP:PDB:NREP 1 RP:PDB:REP 2->221|2axoA|2e-18|76.0|208/217| RP:PFM:NREP 1 RP:PFM:REP 4->183|PF06764|3e-40|44.4|180/200|DUF1223| HM:PFM:NREP 1 HM:PFM:REP 4->198|PF06764|1.5e-64|40.5|195/203|DUF1223| RP:SCP:NREP 1 RP:SCP:REP 2->221|2axoA1|7e-15|86.9|213/218|c.47.1.19| HM:SCP:REP 2->221|2axoA1|3.3e-68|41.4|220/0|c.47.1.19|1/1|Thioredoxin-like| OP:NHOMO 113 OP:NHOMOORG 102 OP:PATTERN -------------------------------------------------------------------- -11--------------------------------------------------------------------------------------------------1---1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111-----111221111111111111111111---2--1-2121-111111112111121111111111111---------1------------------------------------1----------------1111--2111111------------1-------1----11----1------------------------------------------------------------------------------------1-------111-1--1--1---------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------1-------------------------------------------------------------------------1- ------------------------------------------------11--11-----------------------------------------------------------------------------------------------------------------------------------11-2-21------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 214 STR:RPRED 96.8 SQ:SECSTR cccEEEEEEcTTcTTcHHHHHHHHHHHHTccEEEEEEEEccTTcccccccTTccHHHHHHHHHHHHTTcccccccEEEETTTEEEETTcHHHHHHHHHHHHHTTccccccEEEEEccccEEEEEccccccEEEEEEEEEEEEEEEccE######cEEEEEEEEEEEEEE#EccccEEEEEcHHHHHHHTTEEEEEEEEEEcTTccEEEEEEEEEEEccccc DISOP:02AL 220-222| PSIPRED cccEEEEEEcccccccHHHHHHHHHHHccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEcccEEEcccHHHHHHHHHHccccccccccccEEEEcccEEEEEEcccccccEEEEEEEcccEEEEEEEccccccEEEEcEEEEEEEEEEEccccEEEEEEccEEEEEcccccEEEEEEEcccccccccEEEEEEEEccccc //