[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88427.2
DDBJ      :             MFS permease
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  306/915 : Eukaryota  108/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:425 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->266 1pw4A PDBj 5e-04 27.7 %
:RPS:PDB   58->230 2d33D PDBj 9e-05 8.9 %
:RPS:SCOP  4->391 1pw4A  f.38.1.1 * 3e-14 12.1 %
:HMM:SCOP  4->417 1pw4A_ f.38.1.1 * 8.1e-87 28.5 %
:RPS:PFM   23->210 PF07690 * MFS_1 3e-14 30.8 %
:HMM:PFM   20->379 PF07690 * MFS_1 1.1e-51 22.9 336/353  
:BLT:SWISS 4->416 TUB4_AGRVI 3e-73 33.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88427.2 GT:GENE AAK88427.2 GT:PRODUCT MFS permease GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2691891..2693168) GB:FROM 2691891 GB:TO 2693168 GB:DIRECTION - GB:PRODUCT MFS permease GB:PROTEIN_ID AAK88427.2 GB:DB_XREF GI:159140592 LENGTH 425 SQ:AASEQ MVSEKALISKITWRLMPFLGLLYLIAYIDRQNVSYAKLQMVDALSLSEYAYGLGASLFFIGYFLFEVPSNLFLNRFGASKWFARILVSWGAVTIALAYTQNATMFYILRFLLGLCEAGFFPGVLFLMTLWFPRDYRGRMIGLFMIFSALANAVGAPLGGMLLDLDGFLGYAGWEWVFLATGIPAVIAGIVTFFYLDDTPDKAKFLTQDEKDWLKNRLAEENKGMEEHAEDGFKALVNPRVLFMALCYVGFPLAAYGLSYWLPTIVKSFGVSNTTNGFINIIPWIIVAIALFVVPSAADKAKNKTPYIVGPAFVGAFCLLMSALLSDPVLQFAFLCVAAAGIFAGQPVFWSLPGRFLKGAGAAAGIAAINSVGNLGGFVAQNVVPWIKDQTGSTIAPMFFLAFCLALAGVLVIIATRKMGNQVKAA GT:EXON 1|1-425:0| BL:SWS:NREP 1 BL:SWS:REP 4->416|TUB4_AGRVI|3e-73|33.7|413/433| TM:NTM 11 TM:REGION 10->31| TM:REGION 48->70| TM:REGION 75->97| TM:REGION 107->129| TM:REGION 141->163| TM:REGION 175->196| TM:REGION 239->261| TM:REGION 276->298| TM:REGION 315->337| TM:REGION 362->384| TM:REGION 394->415| SEG 154->169|gaplggmlldldgflg| SEG 278->288|iniipwiivai| SEG 358->368|gagaaagiaai| BL:PDB:NREP 1 BL:PDB:REP 10->266|1pw4A|5e-04|27.7|235/434| RP:PDB:NREP 1 RP:PDB:REP 58->230|2d33D|9e-05|8.9|168/499| RP:PFM:NREP 1 RP:PFM:REP 23->210|PF07690|3e-14|30.8|182/347|MFS_1| HM:PFM:NREP 1 HM:PFM:REP 20->379|PF07690|1.1e-51|22.9|336/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 4->391|1pw4A|3e-14|12.1|372/434|f.38.1.1| HM:SCP:REP 4->417|1pw4A_|8.1e-87|28.5|407/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 4154 OP:NHOMOORG 424 OP:PATTERN ------1-2222223----------------------------2-----------------1------ 225-------1-1----11-1---1711111--2221235----2-------1-2--------11-A-2-------------1-----11---1-------1---1-1-3---------------------------------------1-----------------------------------------1-2-----------------55-3-----21---------1-11111111111111111111--------------------------------------------------------------------------2------------111-------------43-11----2-------1-13222-----8-744--1-8--111111111112-34E22J3C----6113121311--522----1-------31333333133--1---------------------------------22--1----INPROI76553PPQP888829GBKAED5-1A85-----511-2321-----2-------------1-1-------1---------------------1-----11----------------------5--1-----------1-------------------------64521425546556656-56467656654657757759FC6311-A497969999748478841-45551-244444444344---------------------------------7767613---A-444348AE1BBCC-677-11111111----2------------23233222-------------------------------------------------------------2- ------1-----113oo*ezika****NOJIFKKLLPQNPKOOEHHWQWm****twgIMPOOWBN8AG1B34PBL643335BBAPA79-TdWoTcFhNXDG9ETHN--3-------------------------------------------------113---2----------12------47-221d-1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 254 STR:RPRED 59.8 SQ:SECSTR #########HHHHHH##HHHHHHHHHHHHHTcHHHHHHHTTcTTccccHHHHHHHHHEEEcTTcccGGGcTTcccccTTccccccHHHHHHHHHHHHHcccHHHHTTccEETTEEccccccccccGGGccccEEEEccccTTccHHHHHHHHcHTcHHccEEEEEEEEccTTcTTcccHHHHHHHHHHHHHHHHcccccccHHHHHHTHHHHHHHHHHTTcTTcEEccTT#HHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHcT############################################################################################################################################################### DISOP:02AL 215-230,422-426| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHcc //