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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88437.1
DDBJ      :             aldose epimerase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  380/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
b.30.5
:339 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->336 1snzB PDBj 4e-65 45.7 %
:RPS:PDB   26->336 3dcdA PDBj 4e-52 14.0 %
:RPS:SCOP  16->336 1l7jA  b.30.5.4 * 4e-90 29.0 %
:HMM:SCOP  4->337 1z45A1 b.30.5.4 * 6.8e-105 46.4 %
:RPS:PFM   23->332 PF01263 * Aldose_epim 1e-53 48.1 %
:HMM:PFM   21->334 PF01263 * Aldose_epim 1e-87 42.2 294/301  
:BLT:SWISS 16->336 GALM_RAT 2e-67 46.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88437.1 GT:GENE AAK88437.1 GT:PRODUCT aldose epimerase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2704613..2705632 GB:FROM 2704613 GB:TO 2705632 GB:DIRECTION + GB:PRODUCT aldose epimerase GB:PROTEIN_ID AAK88437.1 GB:DB_XREF GI:15157934 LENGTH 339 SQ:AASEQ MSDGAAREDFGFTATGEKVERVTISKDGLTAKVITWGAVIQDLRLDGHQAPLVLGFDKFEDYKYSSYFGATPGRNANRIGNGRFAIDGHEYQLELNEKGVTHLHGGSDGMGKRNWMLMEHGESHAVLQIIDPDGRAGYPGNCTVTATYTIRDGGVLSVVYETVTDQPTIANVCQHSYFNLDGADTALGHEISIAADFYLPTNEQQIPTGEIRSVEGTVFDLRHPTPMRRKENGEQVLYDHNFCLSPERRAKRKVARAYSPASDIALEVHTTEPGVQFYSAFKLDVPVPGLDGRHYGPFAGFCLETQIWPDAVNHPDFPHAILRPGETLRQETDYIFRKG GT:EXON 1|1-339:0| BL:SWS:NREP 1 BL:SWS:REP 16->336|GALM_RAT|2e-67|46.3|315/342| BL:PDB:NREP 1 BL:PDB:REP 16->336|1snzB|4e-65|45.7|315/342| RP:PDB:NREP 1 RP:PDB:REP 26->336|3dcdA|4e-52|14.0|271/292| RP:PFM:NREP 1 RP:PFM:REP 23->332|PF01263|1e-53|48.1|287/295|Aldose_epim| HM:PFM:NREP 1 HM:PFM:REP 21->334|PF01263|1e-87|42.2|294/301|Aldose_epim| GO:PFM:NREP 2 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01263|IPR008183| GO:PFM GO:0016853|"GO:isomerase activity"|PF01263|IPR008183| RP:SCP:NREP 1 RP:SCP:REP 16->336|1l7jA|4e-90|29.0|314/338|b.30.5.4| HM:SCP:REP 4->337|1z45A1|6.8e-105|46.4|319/0|b.30.5.4|1/1|Galactose mutarotase-like| OP:NHOMO 772 OP:NHOMOORG 545 OP:PATTERN -------------------------------------------------------------------- -21-1-------------------1------1-------111--3--------11-------1----222-----1111---------33541211---123-222-1-2-----------------------------11------------------------------------------11-------1-------11-------11--------11-121111111--1111111111111111--11211-11-1111331111123322221-1--1111--11111111111-------------111111111--1-11----------1----1111-----11-----------------1---2211------1-111--------11111111111-11111-1211--111111111111-1---1-11111111--------11111----------------------------------1-11-----2221223----2211-----1-22------11-1------1-1--------1---11111-------------1--1------------------2-----------------------------1111-2--2121111211122221111211-------------11111111111111111-11111111111111-11-111111-11111111111111111111111111--1---111-1111----------------11111111-1111111111111------1------11------1111----1-----1121111111-11--11111111-------2--------------1-1-------------------------1-11-1-111-11 ------2-53--12132332223232322222212223221222222222322232333322-12-11-1-11-13314211111121-2-1222-----111111-11-213122-1-1111111121741-21111-11-1111111-111111111--213223511J1211-1117111421687342-1111-1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 324 STR:RPRED 95.6 SQ:SECSTR ###############TcEEEEEETTEccEEEEEETcTTEEEEEEETTTEcccccccccTTTcccccccccEEcccccccGGGEEEETTEEEEccTTccTTccTTccGGGEEGcccEEEEEETTEEEEEEccHHHHHHccccEEEEEEEEETTEEEEEEEEEEccccccEEcEEEccEEEcTTcccGGGEEEEEccccEEEccEETTEEcGcccGGcEEEcTTccEEcccGGcTTccEGTTccEEEEEcccccEEEEEEETTcccEEEEEEEccEEEEEccHHHHHHHcTTcccccccccEEEEEEEcccccTTccGcTTEEEcTTcEEEEEEEEEEEEc DISOP:02AL 1-3| PSIPRED cccccccccccccccccEEEEEEEEcccEEEEEEccccEEEEEEEccccEEEEEccccHHHHHHcccccccccccccEEcccEEEEccEEEEEEEcccccccccccccHHHcEEEEEEEccccEEEEEEEEccccccccEEEEEEEEEEEccccEEEEEEEEEEccccEEEcccccEEEEcccccccEEEEEEEcccEEEEcccccccccEEccccccccccccccHHHHcccccccccccEEEccccccccEEEEEEEccccEEEEEEEcccEEEEEEcccccccccccccEEcccccEEEEEcccccccccccccccEEEccccEEEEEEEEEEEEc //