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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88476.1
DDBJ      :             exodeoxyribonuclease III
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  665/915 : Eukaryota  57/199 : Viruses  0/175   --->[See Alignment]
d.151.1
:267 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->265 2jc4A PDBj 2e-29 35.3 %
:RPS:PDB   1->267 1dewB PDBj 6e-32 26.3 %
:RPS:SCOP  1->266 1bixA  d.151.1.1 * 2e-61 28.2 %
:HMM:SCOP  3->267 1akoA_ d.151.1.1 * 5.2e-66 37.8 %
:RPS:PFM   5->263 PF03372 * Exo_endo_phos 5e-07 35.8 %
:HMM:PFM   3->265 PF03372 * Exo_endo_phos 1.4e-34 23.2 254/276  
:BLT:SWISS 7->266 EX3_ECOLI 2e-26 35.3 %
:PROS 29->38|PS00726|AP_NUCLEASE_F1_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88476.1 GT:GENE AAK88476.1 GT:PRODUCT exodeoxyribonuclease III GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2762799..2763602 GB:FROM 2762799 GB:TO 2763602 GB:DIRECTION + GB:PRODUCT exodeoxyribonuclease III GB:PROTEIN_ID AAK88476.1 GB:DB_XREF GI:15157983 LENGTH 267 SQ:AASEQ MSFSITTWNINSVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFPMKPLKALGYEHVIIHGQKGYHGVAIASKIPLTEDHRQDYCGIGDARHISAIFQVGSRRVRLHNFYVPAGGDEPDRSINPKFGHKLDFIEEMKALRADGVPGTSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETEGMLDIMKKGNWLDLMRLNVPETEKIYTWWSYRAKDWEAANRGRRLDHIWSSQDLGSSLEKIEILREARGWNRPSDHVPVTAHFRF GT:EXON 1|1-267:0| BL:SWS:NREP 1 BL:SWS:REP 7->266|EX3_ECOLI|2e-26|35.3|252/268| PROS 29->38|PS00726|AP_NUCLEASE_F1_1|PDOC00598| BL:PDB:NREP 1 BL:PDB:REP 5->265|2jc4A|2e-29|35.3|249/256| RP:PDB:NREP 1 RP:PDB:REP 1->267|1dewB|6e-32|26.3|255/279| RP:PFM:NREP 1 RP:PFM:REP 5->263|PF03372|5e-07|35.8|232/261|Exo_endo_phos| HM:PFM:NREP 1 HM:PFM:REP 3->265|PF03372|1.4e-34|23.2|254/276|Exo_endo_phos| RP:SCP:NREP 1 RP:SCP:REP 1->266|1bixA|2e-61|28.2|252/275|d.151.1.1| HM:SCP:REP 3->267|1akoA_|5.2e-66|37.8|259/268|d.151.1.1|1/1|DNase I-like| OP:NHOMO 1024 OP:NHOMOORG 737 OP:PATTERN ------1----------------1--------1-1----11111---1-1111--------1------ -111111111111121111-12--121111112222222211111222211222111222111-12222221---1111-------1111111111---2121-1223-2---------------11-111-1-11----------11-111111111111111111111111111111111121-----1--1111111-1-1-11-------1111---1---1111111---------------------1----------11------1---------------------------------------------------1-1111111111111----111111----1--1111-1-1----1-11-1--222432222233332223333322222222222-222222223321233233333334322222223233222222222222222222211211111113522222222222221111122322222221111111111111331111121133223222222232221223222222222222222222222222-111-11--1111------1-11111111111111111111111--1-1----11122111111111111111111111111111111--21112------11111111111111111-1111111111111111111111111111111111111111111111111111-11111111111111111111122222111111111111111111111111111111122221121122222111-11111111111111111111111322323322221211111111111111111111---------------------------------------1 -1--111------1-------------------------------------------------------------------------------------------------1411---1111-111---353-111-11111--2-1-1-1--11-111---111-1211-2-1---1--11111-121-1--11---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 267 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEEcccHHHHHTTHHHHHHHHcccEEEEEccccccTTccGGGGccTTccEEEEcccTTcccEEEEEcccccEEEEccccccTTTcccccEEEEEccccEEEEEEcccccGGGTTTHHHTHHHHHHHHHHHHHHHHHHHHHccEEEEEEccccccGGGcccccTTTTcTTccHHHHHHHHHHHHHTTcEEHHHHHcTTcccccccccccTTHHTHHTcccccEEEEEcGGGGGGEEEEEEcHHHcTTccccccccEEEEEcc PSIPRED ccEEEEEEEcccHHHHHHHHHHHHHHccccEEEEEEEEcccHHccHHHHHHcccEEEEEcccccccEEEEEEEcccccEEEccccccccccEEEEEEEEccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccHHHcccHHHHcccccccHHHHHHHHHHHHHcccEEEHHHHcccccccEEEEEccccccccccccEEEEEEEEcHHHHHHHHccEEEccccccccccccccEEEEEEc //