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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88477.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  68/915 : Eukaryota  13/199 : Viruses  0/175   --->[See Alignment]
b.82.3
:151 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->109 2pqqC PDBj 3e-07 31.7 %
:RPS:PDB   9->125 2byvE PDBj 2e-18 25.9 %
:RPS:SCOP  9->128 1cx4A2  b.82.3.2 * 2e-18 17.8 %
:HMM:SCOP  7->137 1ne6A2 b.82.3.2 * 4.7e-26 35.9 %
:RPS:PFM   39->120 PF00027 * cNMP_binding 9e-11 34.1 %
:HMM:PFM   34->123 PF00027 * cNMP_binding 6.9e-21 34.4 90/91  
:BLT:SWISS 27->133 NTE1_CHAGB 9e-13 32.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88477.2 GT:GENE AAK88477.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2763618..2764073) GB:FROM 2763618 GB:TO 2764073 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88477.2 GB:DB_XREF GI:159140619 LENGTH 151 SQ:AASEQ MALTDDIILLGQVPLFAGFSDDQLRLIAFGAERRRVSAGQILFREHSPAECAFAVTSGHFELFTAGRDGKPLLQATPGKGALLSELALFTLCERKFTAVAVEDSEVIRITRILFHRLVEEFPEVADIVSARIRDNIAALAAGAARLQNRFV GT:EXON 1|1-151:0| BL:SWS:NREP 1 BL:SWS:REP 27->133|NTE1_CHAGB|9e-13|32.7|107/1521| TM:NTM 1 TM:REGION 1->22| SEG 137->144|aalaagaa| BL:PDB:NREP 1 BL:PDB:REP 5->109|2pqqC|3e-07|31.7|101/137| RP:PDB:NREP 1 RP:PDB:REP 9->125|2byvE|2e-18|25.9|116/922| RP:PFM:NREP 1 RP:PFM:REP 39->120|PF00027|9e-11|34.1|82/90|cNMP_binding| HM:PFM:NREP 1 HM:PFM:REP 34->123|PF00027|6.9e-21|34.4|90/91|cNMP_binding| RP:SCP:NREP 1 RP:SCP:REP 9->128|1cx4A2|2e-18|17.8|118/139|b.82.3.2| HM:SCP:REP 7->137|1ne6A2|4.7e-26|35.9|131/0|b.82.3.2|1/1|cAMP-binding domain-like| OP:NHOMO 99 OP:NHOMOORG 81 OP:PATTERN -------------------------------------------------------------------- -11--------------------------------------111-11-----111--1----------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----1----------------------111221111111111111111111---2--3-2121-22232212222111------------1-----------------------------------------------------------------------------------------------------------------------1---1--1--1---111---------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------1-11---------------------11--1-1--11111----------------------------------------------------------------------------------------------------------------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 136 STR:RPRED 90.1 SQ:SECSTR HHHccHHHHHHHcGGGTTccHHHHHHHHHHcEEEEEcTTcEEEcTTccccEEEEEEEccEEEEEcccccGcEEEEEEcTTcEEcGGGGGTTcccccEEEEcccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH############### DISOP:02AL 1-1| PSIPRED cccHHHHHHHHccHHHccccHHHHHHHHHHccEEEEccccEEEcccccccEEEEEEEEEEEEEEEcccccEEEEEEEccccEEEEHHHHcccccEEEEEEEccEEEEEEcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //