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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAL42263.1
DDBJ      :             transcriptional regulator, ArsR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  105/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:104 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->96 1u2wA1 a.4.5.5 * 5.3e-15 27.4 %
:RPS:PFM   23->69 PF01022 * HTH_5 1e-04 43.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL42263.1 GT:GENE AAL42263.1 GT:PRODUCT transcriptional regulator, ArsR family GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1242031..1242345) GB:FROM 1242031 GB:TO 1242345 GB:DIRECTION - GB:PRODUCT transcriptional regulator, ArsR family GB:PROTEIN_ID AAL42263.1 GB:DB_XREF GI:17739660 LENGTH 104 SQ:AASEQ MVQFFHPAREDISLTAVLAALGEPARMGIIRKLWGSESGQNCGAAAPCQDMPRSTLSSHMRILREAGLIRTHKQGVENISVVRLEDMEARFPGLLPSILKFDGQ GT:EXON 1|1-104:0| RP:PFM:NREP 1 RP:PFM:REP 23->69|PF01022|1e-04|43.2|44/47|HTH_5| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01022|IPR001845| GO:PFM GO:0005622|"GO:intracellular"|PF01022|IPR001845| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01022|IPR001845| HM:SCP:REP 1->96|1u2wA1|5.3e-15|27.4|95/0|a.4.5.5|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 121 OP:NHOMOORG 105 OP:PATTERN -------------------------------------------------------------------- ----1---111--------------1------------2--3----14-----1------11--1-4121-------------------------------------------------------------------------------1-----------------111-----------------------111111111-111111--1111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-1---11112------------11-11-1111---2-211-21111---------------11111111-11-----------------------------------------111--------------1---------1--------------1------1--11-------------------------1------11-----------------------------------------------------------------------------------------1-------------------------------11111-----------------------------1------------------------------------------------------------2-11-1111-1-1------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,4-4,103-105| PSIPRED ccccccccHHHccHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccEEEEEEcHHHHHHHHHHHHHHHHHHHcc //