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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ampS
DDBJ      :ampS         aminopeptidase
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  240/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
e.60.1
:412 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->411 2ayiA PDBj e-122 53.6 %
:RPS:PDB   10->412 2ayiA PDBj e-128 53.3 %
:RPS:SCOP  10->412 2ayiA1  e.60.1.1 * e-129 53.3 %
:HMM:SCOP  6->413 2ayiA1 e.60.1.1 * 1.7e-138 46.1 %
:RPS:PFM   10->411 PF02073 * Peptidase_M29 5e-74 43.4 %
:HMM:PFM   10->411 PF02073 * Peptidase_M29 1.3e-145 45.7 392/398  
:BLT:SWISS 11->411 AMPT_THET8 e-125 53.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86090.1 GT:GENE ampS GT:PRODUCT aminopeptidase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(270165..271403) GB:FROM 270165 GB:TO 271403 GB:DIRECTION - GB:GENE ampS GB:PRODUCT aminopeptidase GB:PROTEIN_ID AAK86090.1 GB:DB_XREF GI:15155169 GB:GENE:GENE ampS LENGTH 412 SQ:AASEQ MTVSPIDPVKLEKLAEVAIKVGLQLQKDQDLVITAPLAALPLVRLLTKHAYIAGGGLVTTFYSDEETTLSRYRHASDANFDRASGWLYEGMAKAYANGAARLAIAGDNPMLLAEEDPAKVARANKANSTAYKPALEKISNFDINWNIISYPNPSWAKQVFPGLTEDEAVRKLADAIFAASRVDVADPVAAWAQHNANLAKRSAWLNGERFSALHFTGPGTDVKIGLADGHEWHGGASMAKNGVTCNPNIPTEEVFTTPHALRVDGYVSSTKPLSHQGTLIDDIQVKFEAGRIVEAKASKGEAVLNKVLDTDEGARRLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCYSKCFLDGASLSQDQIKAQGGNSSLIHIDWMIGSNKVDIDGVKPDGSTVPVMRKGEWA GT:EXON 1|1-412:0| BL:SWS:NREP 1 BL:SWS:REP 11->411|AMPT_THET8|e-125|53.6|399/408| SEG 35->42|aplaalpl| BL:PDB:NREP 1 BL:PDB:REP 11->411|2ayiA|e-122|53.6|390/397| RP:PDB:NREP 1 RP:PDB:REP 10->412|2ayiA|e-128|53.3|392/397| RP:PFM:NREP 1 RP:PFM:REP 10->411|PF02073|5e-74|43.4|378/382|Peptidase_M29| HM:PFM:NREP 1 HM:PFM:REP 10->411|PF02073|1.3e-145|45.7|392/398|Peptidase_M29| GO:PFM:NREP 2 GO:PFM GO:0004177|"GO:aminopeptidase activity"|PF02073|IPR000787| GO:PFM GO:0006508|"GO:proteolysis"|PF02073|IPR000787| RP:SCP:NREP 1 RP:SCP:REP 10->412|2ayiA1|e-129|53.3|392/397|e.60.1.1| HM:SCP:REP 6->413|2ayiA1|1.7e-138|46.1|406/0|e.60.1.1|1/1|Thermophilic metalloprotease-like| OP:NHOMO 326 OP:NHOMOORG 254 OP:PATTERN 111-11------------------23322222------------------------------------ 11------------------------------------------------------------1---------------1---1-------------------------1------------------------------1111121-------------------------------------33322--112122222322233233312111123211121222222227321111111111111111111----11---------1111111----11111-11--11111111111-------------1111111111121-2111111111111--1222-1-11-----2211--1-1----1--1-------11111--11111--1---1111111-111-1111111-11-11111111111111--------------111111111111---------------------------------------------------------------------------------------------------------------1-1-111-12111-11111-1-1------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------111111111-1-------------------------1--11-1----11 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 403 STR:RPRED 97.8 SQ:SECSTR #########HHHHHHHHHHHTTTcccTTcEEEEEEcTTcHHHHHHHHHHHHHTTccEEEEEEccHHHHHHHHHHccTTcTTcccHHHHHHHHHHHHTTcEEEEEEcccGGGcTTccHHHHHHHHHHHHHHHHHHHHHHHTTccccccEEcccTTTHHHHcccccHHHHHHHHHHHHHHHcTccccccHHHHHHHHHHHHHHHHHHHHTTccEEEEEETTEEEEEEccTTcccEEcccccccccccccccccccEEEcccTTcEEEEEEccccEEETTEEEcccEEEEETTEEEEEEccccHHHHHHHTTcccGGGcEEEEEcccTTcHHHHHTcccccHHHHHTTccEEEEEcccGGGccccGGccHccHHHHTccccccEEEEEcccTTcEEEEEcTTccEEEEEETTEEc DISOP:02AL 1-4| PSIPRED cccccccHHHHHHHHHHHHHHccccccccEEEEEccHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHcccHHHHHHcccHHHHHHHHHHHcccEEEEEEcccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccEEEEEEEcccEEEcccccEEccccccccccccccEEEcccccccEEEEEEEEEEccccEEEccEEEEEEccEEEEEEcccHHHHHHHHHccccccEEEEEEEEcccccccccccEEEEEEEEccccEEEEEEcccccccccccccccHHHHHHcccccccEEEEEEEEccEEEEEEEEccccEEEEEEccccc //