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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : amtB
DDBJ      :amtB         ammonium transporter
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  647/915 : Eukaryota  141/199 : Viruses  0/175   --->[See Alignment]
f.44.1
:401 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->401 2nuuD PDBj 3e-84 49.4 %
:RPS:PDB   1->399 2b2fA PDBj 2e-80 39.3 %
:RPS:SCOP  3->380 1u77A  f.44.1.1 * 1e-79 46.5 %
:HMM:SCOP  1->380 1u7gA_ f.44.1.1 * 1.2e-118 48.9 %
:RPS:PFM   1->396 PF00909 * Ammonium_transp 3e-67 45.3 %
:HMM:PFM   1->399 PF00909 * Ammonium_transp 5.8e-115 41.6 387/399  
:BLT:SWISS 1->401 AMTB_ECOLI 8e-84 49.4 %
:PROS 156->181|PS01219|AMMONIUM_TRANSP
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88473.2 GT:GENE amtB GT:PRODUCT ammonium transporter GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2757775..2758980 GB:FROM 2757775 GB:TO 2758980 GB:DIRECTION + GB:GENE amtB GB:PRODUCT ammonium transporter GB:PROTEIN_ID AAK88473.2 GB:DB_XREF GI:159140616 GB:GENE:GENE amtB LENGTH 401 SQ:AASEQ MYIATILVLFMIIPGLALFYGGLVRTKNMLSVLMQCTVIGAVMMLVWVIYGYSFAFGGGTGPYFGGFGKLFLSGVSLDSTSATFSQGVVIYEYTFIAFQMTFAAITPALIIGAFAERVKFSAVILFTILWATFVYFPIAHMVWDANGLIFGMGALDFAGGTVVHINAGIAGLIGAIMVGKRTGFGKDMMAPHSMTLTLVGAAMLWFGWFGFNAGSNLEASGGAVLATMNTFLATAAAIVSWSLVESFTRGKASMLGAASGMIAGLVAVTPAAGSVGPMGAIVLGLIVSPICYFFVSVVKNKFGYDDTADVFGVHGIGGIIGALGTGIFTSPLLGGTGKADFSISSQLWTQFVAVAITIVWCAVVSAILYKIVDVIVGLRVPVEAEREGLDLATHGEAAYHS GT:EXON 1|1-401:0| BL:SWS:NREP 1 BL:SWS:REP 1->401|AMTB_ECOLI|8e-84|49.4|393/428| PROS 156->181|PS01219|AMMONIUM_TRANSP|PDOC00937| TM:NTM 11 TM:REGION 2->24| TM:REGION 31->53| TM:REGION 88->110| TM:REGION 120->142| TM:REGION 153->175| TM:REGION 189->211| TM:REGION 223->245| TM:REGION 254->276| TM:REGION 278->299| TM:REGION 315->336| TM:REGION 355->377| SEG 54->68|fafgggtgpyfggfg| SEG 167->176|agiagligai| SEG 312->327|gvhgiggiigalgtgi| BL:PDB:NREP 1 BL:PDB:REP 1->401|2nuuD|3e-84|49.4|393/410| RP:PDB:NREP 1 RP:PDB:REP 1->399|2b2fA|2e-80|39.3|382/391| RP:PFM:NREP 1 RP:PFM:REP 1->396|PF00909|3e-67|45.3|386/395|Ammonium_transp| HM:PFM:NREP 1 HM:PFM:REP 1->399|PF00909|5.8e-115|41.6|387/399|Ammonium_transp| GO:PFM:NREP 4 GO:PFM GO:0006810|"GO:transport"|PF00909|IPR001905| GO:PFM GO:0008519|"GO:ammonium transmembrane transporter activity"|PF00909|IPR001905| GO:PFM GO:0016020|"GO:membrane"|PF00909|IPR001905| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00909|IPR001905| RP:SCP:NREP 1 RP:SCP:REP 3->380|1u77A|1e-79|46.5|370/383|f.44.1.1| HM:SCP:REP 1->380|1u7gA_|1.2e-118|48.9|372/383|f.44.1.1|1/1|Ammonium transporter| OP:NHOMO 1568 OP:NHOMOORG 834 OP:PATTERN ---1--1111111111-1-1---31--112111121122222122212113321-------11---22 212121-222211122211-12--2211111122222333121111--1111233111--111-1-121211111111--1-111212--111--------2-1114111---------------2312122212211-11111315122113112211121133113322111111112111211111--211--1-1111-111111112211111-1-111111111113-11111111111111-111111111111-1-111122-1-1111111111----11---------------------------111----11-13------------22------1--1111111311---1111-2---1121111-----123221-12211211111111111-22121121114-1111111111111111212111111221111111122211211-----------------------------322111111-12222222111122221111112222222-122152-112311212322323131111111---232-323-222122112-222222233222312111--1----------------2122233122122212131222222222211111112----112------11112111111111111-1111111111111111111111111111111111111111111111111111-111111111111-------------42213------------11-22222131111222222223212123222---------41112-11111222211111111111111113-331122---------------------------------222-11--1-11111- ----333-----1124353433334441111111112222222111232235442332244466323212314333323323343323-24234392221222445-3I4D2211--------------------------------------------23A-634-112-54932795*43441D8BJ5747644665 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 401 STR:RPRED 100.0 SQ:SECSTR HHHHHHHHHHHHTHHHHHHHHTTccGGGHHHHHHHHHHHHHHHHHHHHHTHHHHHHcccccccccccccGGEETTTEEccTTGGGTTccTHHHHHHHHHHHHHHHHHHHHGGGGTTTccHHHHHHHHHHHHHHTHHHHHHHHHccccHHHHTTccccccTTTTHHHHHHHHHHHHHHHcccTTTTTcccccccHHHHHHHHHHHHHHHHHHHHGGGccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHTTTTTTccHHHHHHHHHHHHHHHHHHHHHHHHHTTcccTTcHHHHHHHHHHHHHHHHHHHccHHHHccccGGGTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccHHHHHHcHHHHHHccccccc DISOP:02AL 184-189,192-192,400-402| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccHHHHccccccc //