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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : argF
DDBJ      :argF         ornithine carbamoyltransferase
Swiss-Prot:OTC_AGRT5    RecName: Full=Ornithine carbamoyltransferase;         Short=OTCase;         EC=2.1.3.3;

Homologs  Archaea  67/68 : Bacteria  849/915 : Eukaryota  192/199 : Viruses  1/175   --->[See Alignment]
c.78.1
:305 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->305 1pvvA PDBj 9e-88 55.2 %
:RPS:PDB   5->303 3e2pA PDBj 4e-92 25.4 %
:RPS:SCOP  4->148 1a1sA1  c.78.1.1 * 9e-52 53.8 %
:RPS:SCOP  150->305 1a1sA2  c.78.1.1 * 1e-39 52.6 %
:HMM:SCOP  4->303 1tugA1 c.78.1.1 * 1.2e-108 43.7 %
:RPS:PFM   5->145 PF02729 * OTCace_N 8e-31 42.6 %
:RPS:PFM   152->299 PF00185 * OTCace 2e-26 42.9 %
:HMM:PFM   151->301 PF00185 * OTCace 2.5e-51 42.4 151/158  
:HMM:PFM   5->146 PF02729 * OTCace_N 1.2e-49 43.0 142/142  
:BLT:SWISS 1->305 OTC_AGRT5 e-180 100.0 %
:PROS 50->57|PS00097|CARBAMOYLTRANSFERASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86242.1 GT:GENE argF GT:PRODUCT ornithine carbamoyltransferase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 425285..426202 GB:FROM 425285 GB:TO 426202 GB:DIRECTION + GB:GENE argF GB:PRODUCT ornithine carbamoyltransferase GB:PROTEIN_ID AAK86242.1 GB:DB_XREF GI:15155348 GB:GENE:GENE argF LENGTH 305 SQ:AASEQ MASPKHFLDLSAVGPQDLRTILDDARARKVATKAGTAEKPLAGKMLAMIFEKPSTRTRVSFDVGMRQLGGETLFLSGTEMQLGRAETIGDTAKVLSRYVDAIMIRTTDHSRLLELAEHATVPVINGLTDDTHPCQIMADIMTFEEHRGPVKGKTIAWTGDGNNVLHSFVEGSARFGYRMTMAVPMGSEPHDKFMNWARNNGGEIALYHDADKAVAGADCVVTDTWVSMNQEHKARGHNIFQPYQVNEALMAKAQKDALFMHCLPAHRGEEVTDAVIDGPQSVVFDEAENRLHAQKSVIAWCMGVI GT:EXON 1|1-305:0| SW:ID OTC_AGRT5 SW:DE RecName: Full=Ornithine carbamoyltransferase; Short=OTCase; EC=2.1.3.3; SW:GN Name=argF; OrderedLocusNames=Atu0429; ORFNames=AGR_C_755; SW:KW Amino-acid biosynthesis; Arginine biosynthesis; Complete proteome;Cytoplasm; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->305|OTC_AGRT5|e-180|100.0|305/305| GO:SWS:NREP 4 GO:SWS GO:0008652|"GO:cellular amino acid biosynthetic process"|Amino-acid biosynthesis| GO:SWS GO:0006526|"GO:arginine biosynthetic process"|Arginine biosynthesis| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| PROS 50->57|PS00097|CARBAMOYLTRANSFERASE|PDOC00091| BL:PDB:NREP 1 BL:PDB:REP 16->305|1pvvA|9e-88|55.2|290/313| RP:PDB:NREP 1 RP:PDB:REP 5->303|3e2pA|4e-92|25.4|295/306| RP:PFM:NREP 2 RP:PFM:REP 5->145|PF02729|8e-31|42.6|141/142|OTCace_N| RP:PFM:REP 152->299|PF00185|2e-26|42.9|147/157|OTCace| HM:PFM:NREP 2 HM:PFM:REP 151->301|PF00185|2.5e-51|42.4|151/158|OTCace| HM:PFM:REP 5->146|PF02729|1.2e-49|43.0|142/142|OTCace_N| GO:PFM:NREP 5 GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF02729|IPR006132| GO:PFM GO:0016743|"GO:carboxyl- or carbamoyltransferase activity"|PF02729|IPR006132| GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF00185|IPR006131| GO:PFM GO:0016597|"GO:amino acid binding"|PF00185|IPR006131| GO:PFM GO:0016743|"GO:carboxyl- or carbamoyltransferase activity"|PF00185|IPR006131| RP:SCP:NREP 2 RP:SCP:REP 4->148|1a1sA1|9e-52|53.8|145/150|c.78.1.1| RP:SCP:REP 150->305|1a1sA2|1e-39|52.6|156/163|c.78.1.1| HM:SCP:REP 4->303|1tugA1|1.2e-108|43.7|293/0|c.78.1.1|1/1|Aspartate/ornithine carbamoyltransferase| OP:NHOMO 2337 OP:NHOMOORG 1109 OP:PATTERN 22424212222222222222222222222222222222222221222222222222222222224-22 2422222233222221122-2211122222213111222222221212111122221111324212332222222222127422222222222211-1-21212222221---------------222222222222222222222112122222223232232221221212222122122122222221222222223323223332223322332222222323332222133333333433334443213121--121112222--3132214333331222231222222222222222222222222122111222222123222222232222222222212322323222222221232222212223322222113222332222222222222222223-222222223232322223233333221223222222222222222222222212222122222-----------------111121222223332433333333333344444434335222222222223222222322222222332222222222222112222323222222222222222222223222222222222112111111122222223332222322222222226222222222221-3322321122234223324334443433-33433343433333333332222222233333233333333333222222321222223222222111311111111222323111111111-11--122222221122233333333333334233211111111222252222222422222222222222222222222222111111111---------12-1------121-----1222211111222 11--112-311111222212222212222222222222221221222222222222222222223222222122222-2222222222-22222222222221364-23151342432222122432224A2-3221121212211211222122121312312211111611312221H2222242232221132221 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 303 STR:RPRED 99.3 SQ:SECSTR ##TTcccccGGGccHHHHHHHHHHHHHHHHHHHHcccccTTTTcEEEEEEccccHHHHHHHHHHHHHTTcEEEEEccTcHHHHTTccHHHHHHHHHHHccEEEEEcccccHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHccccccEEEEEccTcHHHHHHHHHHTTcTcEEEEEcccTTcccHHHHHHHHHTTccEEEEccGGGccTTccEEEEccccGGGcccHHHHHHHHHHHcccHHHHTTHTcccEEEccccccccccccGGGTTcTTccHHHHHHHHHHHHHHHHHHHHHcc DISOP:02AL 1-2| PSIPRED ccccccEEEHHcccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccccHHHHHHHHHHHHccEEEEEccccEEccccccHHHHHHHHHHHccEEEEEEccHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHcccEEEEEEcHHHHHccccEEEEEEEEEcccccHHHHHHHHHcccccHHHHHHcccccEEEccccccccccccHHHHccccHHHHHHHHccHHHHHHHHHHHHccc //