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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : bdhA
DDBJ      :bdhA         d-beta-hydroxybutyrate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  880/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:258 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->258 2yz7A PDBj 5e-72 51.6 %
:RPS:PDB   3->256 1dohB PDBj 2e-46 18.7 %
:RPS:SCOP  4->256 1pwxA  c.2.1.2 * 4e-49 25.4 %
:HMM:SCOP  1->254 1zemA1 c.2.1.2 * 8.2e-85 41.7 %
:RPS:PFM   3->170 PF00106 * adh_short 1e-28 41.3 %
:HMM:PFM   4->171 PF00106 * adh_short 7e-38 28.8 163/167  
:BLT:SWISS 1->258 BDHA_RHIME 4e-92 63.2 %
:PROS 140->168|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88050.2 GT:GENE bdhA GT:PRODUCT d-beta-hydroxybutyrate dehydrogenase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2284063..2284839 GB:FROM 2284063 GB:TO 2284839 GB:DIRECTION + GB:GENE bdhA GB:PRODUCT d-beta-hydroxybutyrate dehydrogenase GB:PROTEIN_ID AAK88050.2 GB:DB_XREF GI:159140423 GB:GENE:GENE bdhA LENGTH 258 SQ:AASEQ MHRTVIVTGSTSGIGLGIAQRFAREGANIVLNGFGDDDEIEKLRLLLEAESGGRVLYHPADMTKPDEIADLIQSSHEKLGSVDVLINNAGIQHIAPIEEFPTEKWDWIIAINLTSSFHTMRAAIPLMKKAGKGRIINISSAHGLVASPFKSAYVAAKHGIMGLTKTAALELAQTGVTVNAICPGYVLTPLVEKQIPEMAKVRGISEAAVKNDVMLELQATKQFVTVDDVAAAAIFLASDAASNITGTHISVDGGWTAQ GT:EXON 1|1-258:0| BL:SWS:NREP 1 BL:SWS:REP 1->258|BDHA_RHIME|4e-92|63.2|258/258| PROS 140->168|PS00061|ADH_SHORT|PDOC00060| SEG 227->241|ddvaaaaiflasdaa| BL:PDB:NREP 1 BL:PDB:REP 3->258|2yz7A|5e-72|51.6|256/260| RP:PDB:NREP 1 RP:PDB:REP 3->256|1dohB|2e-46|18.7|252/271| RP:PFM:NREP 1 RP:PFM:REP 3->170|PF00106|1e-28|41.3|167/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 4->171|PF00106|7e-38|28.8|163/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 4->256|1pwxA|4e-49|25.4|240/252|c.2.1.2| HM:SCP:REP 1->254|1zemA1|8.2e-85|41.7|252/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 20619 OP:NHOMOORG 1128 OP:PATTERN 2221246AB9B9A99719243211D66B7A7D22---------21154--722-24222143954-56 LJg4w41888G896***WX-W*55z*WVWWWm********7*I*ZMHD6ID3TLPE5E11QNd7VSjhqaG122231222B9Z11323887827331--C7a6HG*FiAN111111111111115A67DG888EBALKKNL222NCNGMKBAA7733433865474FPIhC344334344334KEBBC761K9SGGHGHLFJGHHHKLFSGRRIQHIIBHIOLLEB999B8Ln866666546677665CBBBDA2D1AC16122DH559A9987BD998656676744445555555555576677777777745433255585359D6665445547767727A78431198322C8123325333356454H2KvOOd22222WG*tt77DeYYbSKLNKJJMJNMZ-OSaQMtPad*i2*ttXzp******YgNTJSWYPKNSNLQCCCCCCCCWXXF8CHC22222222221223333441223121112BO**NAJjYPj******USSTOqq**WVVV9U*h*f**l49TUOODNMLZQjQzr9IC6C8FE8222111168CPK8AWBI521211433427B94G4495DFGDRc343324222113135233333352435A9DDAEKHHDQEA7CBBDAFEDBB9EADDA7F1-3467B111111EJHK8OAEHHFEEEEFF-HFEGGDEEFFHEGFFEGFFTYSKCAACC9ACCBCCCCCABACCYEFBEDCD619BBBBBBABBBA111A57555FFEF4MMQL222827211113353STSYUEO9GERCcdXZQYfkSTUZWMWTT7565575554778H98998EEAACMPMPPOLEFG96762265IIA9BB--------1-4----2-1-3-1------3-------45421556663H2 12-1cdO-2-229EKuysf*o*l****PPGNLOSRQNYQSLTTLGHhdn*t***aihSTRNQHEM7BA5F76KCN36356BGHINJ7C-c*UyNmKKEKEEDHPNM-LVF*u*fkkWEEFAOdFpkBcD**j-ddkJHHGfHOlUCLHBEZ79cLYUlq**gL*miXfWl*Lctf8FE9*656FbSmp*f*SJJfNQRE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 258 STR:RPRED 100.0 SQ:SECSTR cTcEEEETTTTcHHHHHHHHHHHHTTcEEEEEEcEccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHccTTcEEEEEccGGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHHHHGGGGcTTcTTccHHHHHHHHHHccTTcccccHHHHHHHHHHHHcGGGTTccccEEEEcccccGc PSIPRED ccEEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEccccccc //