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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : cbiC
DDBJ      :cbiC         precorrin-8X methylmutase
Swiss-Prot:             

Homologs  Archaea  40/68 : Bacteria  307/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.23.17
:210 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->210 1f2vA PDBj 3e-84 72.1 %
:RPS:PDB   6->206 3e7dA PDBj 6e-18 62.2 %
:RPS:SCOP  3->210 1f2vA  c.23.17.1 * 2e-75 72.1 %
:HMM:SCOP  2->210 1f2vA_ c.23.17.1 * 8.4e-79 54.1 %
:RPS:PFM   17->205 PF02570 * CbiC 4e-39 54.5 %
:HMM:PFM   12->207 PF02570 * CbiC 4.7e-77 53.1 194/198  
:BLT:SWISS 1->210 COBH_PSEDE 3e-84 71.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88515.1 GT:GENE cbiC GT:PRODUCT precorrin-8X methylmutase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2802992..2803624) GB:FROM 2802992 GB:TO 2803624 GB:DIRECTION - GB:GENE cbiC GB:PRODUCT precorrin-8X methylmutase GB:PROTEIN_ID AAK88515.1 GB:DB_XREF GI:15158028 GB:GENE:GENE cbiC LENGTH 210 SQ:AASEQ MTDYDYIRDGNAIYERSFAIIREEADLSAFTEEQADIAIRMIHACGQVEAAGHFRFSPDFVSAARGALLAGKPVLCDAQMVAHGVTHARLPADNAVICTLRDPRTPELAKNIGNTRSAAALDLWADYLDGALVAIGNAPTALFYLLEMLEKGGPRPAAIIGMPVGFVGAAESKDALEASALGIPYAIVKGRLGGSAMTAAAINAVARAGL GT:EXON 1|1-210:0| BL:SWS:NREP 1 BL:SWS:REP 1->210|COBH_PSEDE|3e-84|71.9|210/210| SEG 118->132|aaaldlwadyldgal| BL:PDB:NREP 1 BL:PDB:REP 3->210|1f2vA|3e-84|72.1|208/209| RP:PDB:NREP 1 RP:PDB:REP 6->206|3e7dA|6e-18|62.2|201/202| RP:PFM:NREP 1 RP:PFM:REP 17->205|PF02570|4e-39|54.5|187/197|CbiC| HM:PFM:NREP 1 HM:PFM:REP 12->207|PF02570|4.7e-77|53.1|194/198|CbiC| GO:PFM:NREP 2 GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF02570|IPR003722| GO:PFM GO:0016993|"GO:precorrin-8X methylmutase activity"|PF02570|IPR003722| RP:SCP:NREP 1 RP:SCP:REP 3->210|1f2vA|2e-75|72.1|208/209|c.23.17.1| HM:SCP:REP 2->210|1f2vA_|8.4e-79|54.1|209/209|c.23.17.1|1/1|Precorrin-8X methylmutase CbiC/CobH| OP:NHOMO 356 OP:NHOMOORG 348 OP:PATTERN -------111111111--1-1--1----1--1111111111111111111111--------111--11 ---11-1-----1-11111-11--1111111111111111-111----------------11111111111----------11-----11-1-111---------1-------------------11-1-----1111111-----12112211111111--1-11111221111111111-111-11----1-------------------------1111----11---1----------------------------------11---------------------------------------------1----------11-111111111111111111111----111111111--1111----11------------11111---1111111111111111-21111111-1--11111111111111---111111111111111111----11-1-------------------------------1--------111111111111111111111111--------1-21--111-1---1----1------------11-11-1-11111111-111111112-----1-1-----------------------------1-------------------------1------1-------1------------------------------------111--11---------------------------1------------------------1-1-1---------------------------1111111111111-111---------------------1------------------1---1111--------1------------------------------11-------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 208 STR:RPRED 99.0 SQ:SECSTR ##cccccccHHHHHHHHHHHHHHHcccTTccHHHHHHHHHHHHHHTcGGGGGGEEEcTTHHHHHHHHHHTTccEEEccHHHHHHccGGGccccccEEccTTcTTHHHHHHHHTccHHHHGGGGGGGGcTTcEEEEcccHHHHHHHHHHHHTTcccccEEEEcccccccHHHHHHHHHHccTTccEEEEccccccHHHHHHHHHHHHcccc PSIPRED ccHHHHHccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHEEccHHHHHHHHHHHccccEEEcHHHHHHcccHHHHHccccEEEEEcccHHHHHHHHcccHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHcc //