[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : cfa.1
DDBJ      :cfa          cyclopropane-fatty-acyl-phospholipid synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  483/915 : Eukaryota  117/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:418 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   126->370 1kp9A PDBj 7e-35 36.6 %
:RPS:PDB   111->384 2eg5A PDBj 3e-35 12.0 %
:RPS:SCOP  126->384 1kp9A  c.66.1.18 * 2e-80 35.4 %
:HMM:SCOP  109->384 1kpgA_ c.66.1.18 * 5.8e-79 37.1 %
:RPS:PFM   117->380 PF02353 * CMAS 4e-71 51.9 %
:HMM:PFM   115->380 PF02353 * CMAS 3.3e-90 41.7 264/273  
:BLT:SWISS 120->384 YLP3_PSEPU 9e-55 40.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86457.1 GT:GENE cfa.1 GT:PRODUCT cyclopropane-fatty-acyl-phospholipid synthase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 641451..642707 GB:FROM 641451 GB:TO 642707 GB:DIRECTION + GB:GENE cfa GB:PRODUCT cyclopropane-fatty-acyl-phospholipid synthase GB:PROTEIN_ID AAK86457.1 GB:DB_XREF GI:15155601 GB:GENE:GENE cfa LENGTH 418 SQ:AASEQ MASSLHVLLEKIIKIGDLTVNSPGGSRTFGDGTGKKVVLNFTDEAAMQEIAADPALKLAEMYMEGRAKVAKGDIYDFLALVKGNTLSEALSFGMIWRGMARIIAARIKMRLPVNHNKSNVAHHYDLSAKLFDLFLDEDWQYSCAYFNPPDIGLYEAQVAKKRHIAAKLMTEPGQSVLEIGSGWGGMAMYIAESAGADVTGITLSEEQLRVSRDRAAKRGLAGNVRFELQDYRYLPASKKYDRIVSVGMFEHVGPTHYRDYFDKVAEVLDDKGVMVLHSIGQPYPALATNPFIEKYIFPGGYIPSLAEVLPAIQKSGLLVKDIEILPMHYAHTLRHWRERFVARKAEAVALYDERFFRMWEFYLAGSEMAFTHENFHIFQIQLAKDRDAVPHNRDYIAQNEAKLLEFEKTRPPLEKVSF GT:EXON 1|1-418:0| BL:SWS:NREP 1 BL:SWS:REP 120->384|YLP3_PSEPU|9e-55|40.9|264/394| BL:PDB:NREP 1 BL:PDB:REP 126->370|1kp9A|7e-35|36.6|243/270| RP:PDB:NREP 1 RP:PDB:REP 111->384|2eg5A|3e-35|12.0|267/344| RP:PFM:NREP 1 RP:PFM:REP 117->380|PF02353|4e-71|51.9|262/271|CMAS| HM:PFM:NREP 1 HM:PFM:REP 115->380|PF02353|3.3e-90|41.7|264/273|CMAS| GO:PFM:NREP 1 GO:PFM GO:0008610|"GO:lipid biosynthetic process"|PF02353|IPR003333| RP:SCP:NREP 1 RP:SCP:REP 126->384|1kp9A|2e-80|35.4|257/270|c.66.1.18| HM:SCP:REP 109->384|1kpgA_|5.8e-79|37.1|272/285|c.66.1.18|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 1092 OP:NHOMOORG 600 OP:PATTERN -------------------------------------------------------------------- 1---41--111121388AA-A555B8A9AAA867771454-333---------23--2--112--121131-111111-----11----------------------------------------22-222111-2111-------1------12-----------2--1-------------111--------111111-21-21--2------1-------------------------------------11211111111221111111111-11111----------------------------------111-------121111111-1--1221111-1----------------------------2224-----112331113222211-11111112---1--1--242-2334122322222211111111111121111111151111-22-----------------------------222321211-11111115111133312222123231211-11231234242221132121-322----------121-121131-1----------121-111-1-3111----11111-1-1111111-----1111-121121111111111-111111--1-1----222------11132221111111111-111111111111111111122222111111111111111111121111111--111111111111---3-----111122221---------------22--2-211111111132222222221221-1-11-1---11111111111113322222222--------22----------------------------------------------------- ----131-2---2333333211133331111111111111-11-11552222523331233311111111--111------11111---48532561113123111-12-2----------------------------------------------------21------112-2222E22212322B3642142112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 384 STR:RPRED 91.9 SQ:SECSTR ##################################HHHHHHccHHHHHHHHTccHHHHHHHHHHHHHHHHHHTcEEETTEEEEcHHHHHHHHcHHHHHHHHHHHHTTHHHHTTEEEEEEETccccHHHHHHHHHHHHHHHHHccccccEEEEEEEccTTccHHHHHHTHHHHHHHHHHHHcccTTcEEEEEccccTTcccccTTcEEEEEEEccTTccccccGTcccTTcTTcccccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEccccTTccccTTTTcccccccccHHHHHHHHHHHccEEEEEEEEEEEETTTTcccTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTccEEEEccEEEEEEEEEETccccccEEEEEEEcccHHHHTcccccccccccE DISOP:02AL 412-418| PSIPRED ccHHHHHHHHHHHHcccEEEEEccccEEcccccccEEEEEEccHHHHHHHHcccHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccccEEEEEEcHHHccccccccEEEEEHHHHHccHHHHHHHHHHHHHHcccccEEEEEEEccccccccccHHHHHHHccccccccHHHHHHHHHHcccEEEEHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccHHHHHHHHHHHHHHHcccccHHHHcc //