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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : cobA
DDBJ      :cobA         uroporphyrin-III C-methyltransferase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  646/915 : Eukaryota  115/199 : Viruses  0/175   --->[See Alignment]
c.90.1
:262 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->262 1s4dG PDBj 8e-62 48.0 %
:RPS:PDB   22->255 2ehlA PDBj 5e-46 13.9 %
:RPS:SCOP  20->257 1pjqA2  c.90.1.1 * 2e-59 47.8 %
:HMM:SCOP  19->257 1s4dA_ c.90.1.1 * 4.4e-59 40.2 %
:RPS:PFM   22->230 PF00590 * TP_methylase 5e-17 34.3 %
:HMM:PFM   21->231 PF00590 * TP_methylase 4.7e-44 30.5 203/210  
:BLT:SWISS 6->262 SUMT_PSEDE 2e-60 47.5 %
:PROS 99->132|PS00840|SUMT_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88507.2 GT:GENE cobA GT:PRODUCT uroporphyrin-III C-methyltransferase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2796348..2797136) GB:FROM 2796348 GB:TO 2797136 GB:DIRECTION - GB:GENE cobA GB:PRODUCT uroporphyrin-III C-methyltransferase GB:PROTEIN_ID AAK88507.2 GB:DB_XREF GI:159140634 GB:GENE:GENE cobA LENGTH 262 SQ:AASEQ MSIPQILNSIAAKGPVFEAGHVWLAGAGPGDVRYLTLEVALALSQADIIVRDALVSDDVVALGPQAEVVFAGKRGGKPSATQDDITASLIDFALQGKKVLRLKGGDPFIFGRGGEEAEALVHAGIPFRILPGMTSSFTALASARIPATMRGISRAVTLATGHAAGTEEDLDWLALAKTQEPIVVYMGLKNIGTIAGLLMQGGRSGKTPVAVIMSATTAKERIFIGTLQSIADDAKRESFEAPALIIIGEIVSMRDRLGVSGS GT:EXON 1|1-262:0| BL:SWS:NREP 1 BL:SWS:REP 6->262|SUMT_PSEDE|2e-60|47.5|257/280| PROS 99->132|PS00840|SUMT_2|PDOC00656| BL:PDB:NREP 1 BL:PDB:REP 15->262|1s4dG|8e-62|48.0|248/258| RP:PDB:NREP 1 RP:PDB:REP 22->255|2ehlA|5e-46|13.9|231/265| RP:PFM:NREP 1 RP:PFM:REP 22->230|PF00590|5e-17|34.3|204/206|TP_methylase| HM:PFM:NREP 1 HM:PFM:REP 21->231|PF00590|4.7e-44|30.5|203/210|TP_methylase| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00590|IPR000878| GO:PFM GO:0008168|"GO:methyltransferase activity"|PF00590|IPR000878| RP:SCP:NREP 1 RP:SCP:REP 20->257|1pjqA2|2e-59|47.8|226/233|c.90.1.1| HM:SCP:REP 19->257|1s4dA_|4.4e-59|40.2|239/0|c.90.1.1|1/1|Tetrapyrrole methylase| OP:NHOMO 1513 OP:NHOMOORG 817 OP:PATTERN 11-1-12333333332-1423233222221222222222222222222222222-------122--22 1121213211122123333-32113233333322222222233311112---22211---22423432223--------1122111-211-11111-----2-11312-1---------------3312211113323322---1-334333344222122222333333322211112212122122---13222222212222222221221222233341--2222223211111111111111122221-------------22---------------------------------------------2---------12222222222222222222222321---2222232221-23221-1-22-112222-----132121122323322332333333-32222121121-2334223222231222154222224242222222221111412------------------------------12222111124444443333344443333234442222-211224122123121222121231--21111111232-22121221221111222222232-11-12121-------------------11-11114242222-21211111221111111221421--1331---11122222121111111111-1111111111111111111333333322222222222222222311111111-52112222222211-1---------2122211-1-1---------11111111222244442233333333333---------111131111123233--222221111111112-222222--------1------------------------------22-----111 ------2-------311111111111111111111111111-111111111111-111111111211111111111111111121111-121111111111-1222--1----------------------------------------------------------------1-2122F2222221211111222222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 251 STR:RPRED 95.8 SQ:SECSTR ###########ccccccTTcEEEEEEcccccGGGccHHHHHHHHTccEEEEEccccccTTccHHHHHHHHTccEEEEcHHHHHHHHHHHTHHHHTTccEEEEEcccTTccccGGGHHHHHHHTTcEEEEEcccccHHHHGGGGTccGGGccccEEEccccTTcccHHHHHHHHHHHTTccEEEEEHHHHHHHHHHHHHccccccTTcEEEEEEcTTccccEEEEEEHHHHTTHTcccccccEEEEEcccccHHHHHHcTTcT DISOP:02AL 1-20,261-263| PSIPRED cccccccccHHHccccccccEEEEEEcccccHHHccHHHHHHHHHccEEEEcccccHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHccccEEEEccccHHHHHHHHHccccccccccEEEEEEccccccccccccHHHHHccccEEEEEccHHHHHHHHHHHHHcccccccEEEEEEEccccccEEEEEEHHHHHHHHHHccccccEEEEEEHHHHHHHHHccccc //