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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : cobB
DDBJ      :cobB         cobyrinic acid a,c-diamide synthase
Swiss-Prot:COBB_AGRT5   RecName: Full=Cobyrinic acid A,C-diamide synthase;

Homologs  Archaea  51/68 : Bacteria  366/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
c.23.16c.37.1
:438 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   35->195 2bsfA PDBj 2e-33 15.9 %
:RPS:PDB   247->438 2abwA PDBj 2e-13 12.2 %
:RPS:SCOP  3->195 1a82A  c.37.1.10 * 2e-10 18.6 %
:RPS:SCOP  253->351 1fy2A  c.23.16.4 * 9e-12 10.1 %
:HMM:SCOP  1->200 1byiA_ c.37.1.10 * 6.9e-43 37.8 %
:HMM:SCOP  244->438 1q7rA_ c.23.16.1 * 8.6e-28 33.0 %
:RPS:PFM   290->395 PF07685 * GATase_3 4e-10 45.5 %
:HMM:PFM   286->436 PF07685 * GATase_3 1.2e-28 31.7 142/158  
:HMM:PFM   6->195 PF01656 * CbiA 4.6e-21 27.9 165/194  
:BLT:SWISS 1->438 COBB_AGRT5 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88506.1 GT:GENE cobB GT:PRODUCT cobyrinic acid a,c-diamide synthase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2795035..2796351) GB:FROM 2795035 GB:TO 2796351 GB:DIRECTION - GB:GENE cobB GB:PRODUCT cobyrinic acid a,c-diamide synthase GB:PROTEIN_ID AAK88506.1 GB:DB_XREF GI:15158017 GB:GENE:GENE cobB LENGTH 438 SQ:AASEQ MTARAIIIGAPRSGSGKTSVTIGLLRAFARRGVKVRGIKTGPDYIDPGFHAFATGTPGLNLDSWAMQPDLLRHLFSQQTEDAELILIESAMGLFDGIPVAENRTGSAADLARLFRIPVLLVLDVSGQSQTAATIAHGFAHYDPDVTMGAVVLNRAGSERHRTLCTEAIEKIGLPVVGCVLRDPSLILPERHLGLVQASEHPEIDPHIDRLADAMEKSIDLDTLFSLAAPVDMPCGSVAAAIAPPGQRIALAEDAAFTFLYPHLRRHWRAAGAEIVPFSPLADEAPDESCDICWLPGGYPELFAGKLADAVGFKAGITRFAETKPVHGECGGYMVLGERLEDAEGVIHAMTGLLSHATSFATRKMNLGYRQATIAADSPLGMAGDVLRGHEFHYARVIDPGRDQPFAHMADGQGRPLGPSGGRRGFVSGTFFHAIAKGG GT:EXON 1|1-438:0| SW:ID COBB_AGRT5 SW:DE RecName: Full=Cobyrinic acid A,C-diamide synthase; SW:GN Name=cobB; OrderedLocusNames=Atu2793; ORFNames=AGR_C_5069; SW:KW Cobalamin biosynthesis; Complete proteome; Glutamine amidotransferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->438|COBB_AGRT5|0.0|100.0|438/438| GO:SWS:NREP 2 GO:SWS GO:0009236|"GO:cobalamin biosynthetic process"|Cobalamin biosynthesis| GO:SWS GO:0006541|"GO:glutamine metabolic process"|Glutamine amidotransferase| SEG 411->424|gqgrplgpsggrrg| RP:PDB:NREP 2 RP:PDB:REP 35->195|2bsfA|2e-33|15.9|157/176| RP:PDB:REP 247->438|2abwA|2e-13|12.2|189/216| RP:PFM:NREP 1 RP:PFM:REP 290->395|PF07685|4e-10|45.5|99/151|GATase_3| HM:PFM:NREP 2 HM:PFM:REP 286->436|PF07685|1.2e-28|31.7|142/158|GATase_3| HM:PFM:REP 6->195|PF01656|4.6e-21|27.9|165/194|CbiA| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF07685|IPR011698| GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF07685|IPR011698| RP:SCP:NREP 2 RP:SCP:REP 3->195|1a82A|2e-10|18.6|188/224|c.37.1.10| RP:SCP:REP 253->351|1fy2A|9e-12|10.1|99/220|c.23.16.4| HM:SCP:REP 1->200|1byiA_|6.9e-43|37.8|193/224|c.37.1.10|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 244->438|1q7rA_|8.6e-28|33.0|176/202|c.23.16.1|1/1|Class I glutamine amidotransferase-like| OP:NHOMO 485 OP:NHOMOORG 426 OP:PATTERN ------1111111111-211111111111-111111112111122222222322-------111--11 ---11-1-----1-11111-11--1111111111111111-111----------------11111211111----------11-----11-1-111---------1-1-----------------22222222212111111111-11111111111111111-111111111111111111111111----1-----------------1-------1111---1111111----------------------------------11---------------------------------------------1----------1111111111111111111---11----111222221--122111--11-1----------11111---1111111111111111-11111111-1--11111111111111---111111211111111111----11-1-------------------------------1--------111111111111111111111111---1----1-311111111-11111111-----------111-2212122222222-111111111-----1-2-----------------------------2-1-1---------------------1-----221------1---1--------------------------------111--11-111-1111111111-1----------1------------------------111-1-------------------------1-11111111111111111---------------------1-----1-11-------112---1111--------1---------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------17111111-----1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 438 STR:RPRED 100.0 SQ:SECSTR cccEEEEEEEccTTccHHHHHHHHHHHHTTcEEEccTTTTcccccTTcEEEEETTEEEEcccTTTEEEcccEEEcccccEEEEEEEEEEEEccccEEEEEEEEEEEEEccEEEcccEEEEEEEGGGEEcccccGGGGcHHHHTccEEEEEEEEETTEEEEEEEEETTEEEEEEEccccccEEEEEEEEEEEEEEEccTTTccccccEEEEccccEEcEEccTTGGGHHTcccccTccHHHHHHHHHEEEEEcTTcccHHHHHHHHTTccTTEEEEEEccHHHHHTTHTccEEEEcccHHHHHHTTHHHHHHHHHHHHHHHTcccEEEETHHHHHTEEEEEccccccTTGGGcccccEEEEEEcccccEEEEEcEEccccTTccTTcEEEEEcccEEEEcTTcEEEEEEEETTTEEEEEEEEEETTEEEEcccGGGccc DISOP:02AL 1-2| PSIPRED ccccEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHccccEEEEEcccHHcccccccccccccHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccccccccccEEEEEEccccEEEcHHHHHHHHHcccEEEEEEEcccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHEEcccccEEccEEEEEEEEEEccccccccEEEEEEcccccccccccEEEEEEEEEEEEEcccccccEEEEEccccccccccEEEEccEEEEEEEEEcccc //