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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : cobM
DDBJ      :cobM         precorrin-4 C11-methyltransferase
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  565/915 : Eukaryota  65/199 : Viruses  0/175   --->[See Alignment]
c.90.1
:257 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->229 2cbfA PDBj 4e-37 36.0 %
:RPS:PDB   1->226 2cbfA PDBj 5e-41 38.2 %
:RPS:SCOP  1->229 1cbfA  c.90.1.1 * 1e-53 38.2 %
:HMM:SCOP  2->251 1s4dA_ c.90.1.1 * 3e-57 31.9 %
:RPS:PFM   3->208 PF00590 * TP_methylase 1e-15 33.5 %
:HMM:PFM   3->208 PF00590 * TP_methylase 1.3e-40 28.5 200/210  
:BLT:SWISS 1->253 COBM_PSEDE e-102 71.9 %
:PROS 6->20|PS00839|SUMT_1
:PROS 76->109|PS00840|SUMT_2
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88509.1 GT:GENE cobM GT:PRODUCT precorrin-4 C11-methyltransferase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2798280..2799053) GB:FROM 2798280 GB:TO 2799053 GB:DIRECTION - GB:GENE cobM GB:PRODUCT precorrin-4 C11-methyltransferase GB:PROTEIN_ID AAK88509.1 GB:DB_XREF GI:15158020 GB:GENE:GENE cobM LENGTH 257 SQ:AASEQ MTVHFIGAGPGAADLITVRGRDLIAACPVCLYAGSLVPKALIDYCPPGARIVDTAALSLDEIEAEFVAAAKAGKDVARLHSGDLSIWSAMGEQIRRLERLGLDYTVTPGVPSFAAAAATLQRELTVPEMAQSLVLTRISGRASKMPEGETLKAFGATGATLAIHLAIHAIGKVVEELTPLYGSDCPVAIVVRASWPDERIIRGTLFDIEGKLVAEPVERTALIFVGHGLASTDFRESALYSADYVRRFRSPKEDGAG GT:EXON 1|1-257:0| BL:SWS:NREP 1 BL:SWS:REP 1->253|COBM_PSEDE|e-102|71.9|253/253| PROS 6->20|PS00839|SUMT_1|PDOC00656| PROS 76->109|PS00840|SUMT_2|PDOC00656| TM:NTM 2 TM:REGION 1->19| TM:REGION 22->44| SEG 161->170|laihlaihai| BL:PDB:NREP 1 BL:PDB:REP 1->229|2cbfA|4e-37|36.0|228/234| RP:PDB:NREP 1 RP:PDB:REP 1->226|2cbfA|5e-41|38.2|225/234| RP:PFM:NREP 1 RP:PFM:REP 3->208|PF00590|1e-15|33.5|200/206|TP_methylase| HM:PFM:NREP 1 HM:PFM:REP 3->208|PF00590|1.3e-40|28.5|200/210|TP_methylase| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00590|IPR000878| GO:PFM GO:0008168|"GO:methyltransferase activity"|PF00590|IPR000878| RP:SCP:NREP 1 RP:SCP:REP 1->229|1cbfA|1e-53|38.2|228/240|c.90.1.1| HM:SCP:REP 2->251|1s4dA_|3e-57|31.9|248/0|c.90.1.1|1/1|Tetrapyrrole methylase| OP:NHOMO 1064 OP:NHOMOORG 683 OP:PATTERN -----11222222221-2312132211221212222222222222122222222-------121--22 11-12-21---11-21111-12--22111112211111111112-----------11---11212322222----------21--1--11-1-111-----2-1-211-----------------2212111112221111-----121211222112121111222113321212221211222-22----2222222212222222221221222123321--2222223211111111111111122221-------------22---------------------------------------------2----------211311111112121222211211----1112232211-23221---21--1---1-----233221-22323222222222222-3212222212--23332222222223121322222222222222222-11113-2------------------------------12112111122222222222222232222222222112-2112-321122213-22111--31----1--11-121-2212-222212211222222233-----212-------------------------111-3121--2111111121-1111-1111311--1311------22221111111111111-1111111111111111111333212112222222222222222111111111-31--1111111111-1---------1121111-------------11111111211122222232222222222---------11112------1111---1-11111------1-221111--------1------------------------------11-----111 ------1-------11-11--------111------1---1--------------1-1----1-1111-11111-11111111-1111-121-11-11111--122--1----------------------------------------------------------------1----171-1--2-111111-11222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 251 STR:RPRED 97.7 SQ:SECSTR cEEEEEEEEcccTTcccHHHHHHHTTccEEEEEcccccHHHHTTccTTcEEEEEccccHHHHHHHHHHHHHTTccEEEEEEccTTcccccHHHHHHHHHTTcEEEEEccccHHHHHHHHTTcccccTTTcccEEEEEcccccccccGGGcHHHHGGGccEEEEETcGGGHHHHHHHHHHTccTTcEEEEEEcTTcTTcEEEEEEGGGHHHHHHHTTccccEEEEEcccccHHHHHHHHHHHcccGGGGccc###### DISOP:02AL 250-257| PSIPRED cEEEEEEcccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHcccccEEEEcccccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHcccccccccccEEEEEEEccccccccHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHccccccEEEEEEccccccEEEEEcHHHHHHHHHHccccccEEEEEEccccccccccccccccHHHccccccHHcccc //