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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : cobN
DDBJ      :cobN         cobaltochelatase subunit
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  241/915 : Eukaryota  21/199 : Viruses  0/175   --->[See Alignment]
b.82.1c.47.1d.264.1
:1116 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   2->215 1bssB PDBj 2e-24 9.9 %
:RPS:PDB   274->445 2dhhA PDBj 7e-04 14.2 %
:RPS:PDB   744->842 2a2pA PDBj 6e-19 14.9 %
:RPS:PDB   982->1093 2cfaA PDBj 5e-08 14.2 %
:RPS:SCOP  484->620 1pmiA  b.82.1.3 * 5e-15 12.6 %
:RPS:SCOP  744->842 2a2pA1  c.47.1.23 * 6e-25 14.9 %
:RPS:SCOP  1055->1092 1g71A  d.264.1.1 * 7e-05 21.1 %
:RPS:PFM   175->688,693->1100 PF02514 * CobN-Mg_chel 1e-95 42.9 %
:HMM:PFM   141->689 PF02514 * CobN-Mg_chel 1.4e-152 38.5 548/1089  
:HMM:PFM   693->1097 PF02514 * CobN-Mg_chel 1.1e-141 43.9 401/1089  
:BLT:SWISS 1->687,710->1103 COBN_PSEDE e-114 37.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88517.1 GT:GENE cobN GT:PRODUCT cobaltochelatase subunit GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2804976..2808326) GB:FROM 2804976 GB:TO 2808326 GB:DIRECTION - GB:GENE cobN GB:PRODUCT cobaltochelatase subunit GB:PROTEIN_ID AAK88517.1 GB:DB_XREF GI:15158030 GB:GENE:GENE cobN LENGTH 1116 SQ:AASEQ MHILATTSSSLDDLIEPVDLNQPRSDVVVLSFSASDLAGLERAWGKAGETLPSLSAANLSELRHPMSVDLWIEKTAEHARVILIRILGGAERWRYGVDQLAILARRRGIKLLLLPGECSERDEKLEAASTVDKPMLASVLSFFREGGRENMGRLAAGLSVLAGGGEWPDIKADPLPKAGFYRPDLGVVGQDEACAGFPAGASVLPILFYRSMLLAEDAAPVDALFQALSARGFAPLPIFVSGLKDGEAIRFLETVLPALQPAAIIAATAFASHTDDRGETLFDRLGVPVFQAVMATTRRVGWVENARGLNPSDLAMHVVLPELDGRILTGAISFKQARTDGGVSLVNVPEADRIEQVANRIAAFLRLKSAPPRDRRIVILMPDYPGAAPGRTGYAVGLDVPQSVLEMLRDLAEAGYAVEDIPETARALLDRIESQEATVDLSTYRDFFAGLTETASSSMNATWGAAEQDDAFADGAFHFRVARFGQVFVALAPDRGRNEDRRVDYHDPALPPRHALVAFGAWMQSVVATHAIVHVGAHGTLEWLPGKTVALSRDCFPEIVTGPLPVVYPFIVSNPGEAAVAKRRIAAVTIGHVPPVLVNAGLSPEQLALEQLVDEYAQADGLDRRRRDRLAKLIVEKALETGLAAEAGVGAKDDADAALSRIDAFLCDLKDFAIKDGQHVFGRSPEGEADPLRLQSAKAEKAALLAALDGRHIAPGPSGAPARGRLDVLPTGRNLYAADPRTMPTPTAFDLGRMAGEEVLRHHLQSHGDWPKHLVFDLWGSASLRNGGEDVAQALHLMGARPIHDPATGRVTGIEVLPPASLGRPRVDVTFRISGLFRDMFPALIALLDAAAKAVARRDEAPGDNPLAEEAAALGHIPARIFGSAPGTYGAGIEEKLASGTWDEREELGQAYLDAANHAFGGADGLEIFEDAGFTELVRRADLLVHTGDDPGRDLLDGSSDVAFIGGFSAAKAVLGGIADIVALDTTDPARPRARSMTQALTRVVRARAVNPRFIAGQMRHGPRGAAEFAETVDRLVGFAETTHVVSSSLIEALYDAYFGNEEVRDFILRENPKAAEVMAARFLSARRRGLWHSRRNAVDAELEMLILPRSERVGA GT:EXON 1|1-1116:0| BL:SWS:NREP 1 BL:SWS:REP 1->687,710->1103|COBN_PSEDE|e-114|37.2|1073/1275| SEG 152->165|grlaaglsvlaggg| SEG 256->271|lpalqpaaiiaatafa| SEG 622->630|ldrrrrdrl| SEG 644->658|aaeagvgakddadaa| SEG 697->708|akaekaallaal| SEG 843->856|alialldaaakava| RP:PDB:NREP 4 RP:PDB:REP 2->215|1bssB|2e-24|9.9|191/228| RP:PDB:REP 274->445|2dhhA|7e-04|14.2|169/1022| RP:PDB:REP 744->842|2a2pA|6e-19|14.9|94/129| RP:PDB:REP 982->1093|2cfaA|5e-08|14.2|106/179| RP:PFM:NREP 1 RP:PFM:REP 175->688,693->1100|PF02514|1e-95|42.9|911/1074|CobN-Mg_chel| HM:PFM:NREP 2 HM:PFM:REP 141->689|PF02514|1.4e-152|38.5|548/1089|CobN-Mg_chel| HM:PFM:REP 693->1097|PF02514|1.1e-141|43.9|401/1089|CobN-Mg_chel| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF02514|IPR003672| RP:SCP:NREP 3 RP:SCP:REP 484->620|1pmiA|5e-15|12.6|135/440|b.82.1.3| RP:SCP:REP 744->842|2a2pA1|6e-25|14.9|94/120|c.47.1.23| RP:SCP:REP 1055->1092|1g71A|7e-05|21.1|38/344|d.264.1.1| OP:NHOMO 524 OP:NHOMOORG 293 OP:PATTERN ------1--------------11-11111-1121922212232---1252B537-----1-1------ ---11-1-----2-11111-11--1111111111111111-111----------------11131111111-----------1-----2221--11----1----1-1-----------------3524333335544434---1-333333333222222222323333322222222222211--------------------------------------------------------------------------------------------------------------------------------------------1----------------------------121----------------------------12122---3223211111111111122222122-1--11111111111111---221222221111111111----1112-------------------------------1--------111111111111111111111111--------1----11---------1111--------1---1--3----------------1--1-3-------1-------------------------------------------------1----1-------1---------------------------------------------------------------------------------------------------------1-1-------------------------1-22221111111111111--------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------3------------------------------------------------------1-----------2122Z222122252-1122----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 581 STR:RPRED 52.1 SQ:SECSTR HTccccEEEcTTcEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcEEEccccccccccEEEEccccTTcEEEEEEEEEEEcccccEEEEcccTTTcTcTTccccccGGGEEEEEEE###GGGEEEEEEEEEEEEcccccEEGGGGGGcccccEEEEEEEEEHHHTTcEEEEccccHHHHHHTccccHHHHTTccccHHHHHHHHHT##########################################################HHHHHHHHHHTTccccTTTEEEEEEEEEEccccEEEEEEE##EEEEEccTTTcHHHHHHHHHTcccTTcccEEEcccTTccccccccEEEEEEccccccTTHHHHHHHHccGGGc#cccEEcccccEEcccccccHHHHHHTccHHHHHHHHHHHHHcccccEEEccccEEE##########################################################################################################################################################################################################################################################################################################cccccHHHHTTccEEEEEETTccccTTHHHHHHTTTHHHHcTTE#####EEEEEcccccEEEEEcccccccEEEEcccccHHHHHHHHHHHTccccccT###########################################################################################################################################EEEEEEcccccTTcccHHHHHHTTccccccHHHHHHccTTccGGGGGccEEEEEEEEEHHHHHHHTT######cTTcEEEEccccTHHHHHHHHHHHHHHHHHHHHHTTccH####################### DISOP:02AL 616-629, 1115-1116| PSIPRED ccEEEcccccccccccEEEcccccccEEEEEEccHHHHHHHHHHHHcccccccEEEEcHHHcccHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHccccEEEEEccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHccccccccEEEEEEEHHHHcccccHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHcccccccEEEEEEHHHcccccHHHHHHHHHccccEEEEEEccccHHHHHHccccccHHHHHHHHHHHHHcccEEEEEEEEEEcccccccEEEEcccHHHHHHHHHHHHHHHHHHcccHHHcEEEEEEEEccccccccEEEEEcccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHccccccccccccccEEEEEEEEccEEEEEcccccccccccHHHccccccccHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccccHHHHHccccEEEEEccccccHHHHHHHHHccEEEEccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEcccccHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEHHHHccccccHHHHHHHcccEEEEEccccEEEEEEEEcHHHcccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccccccccccHHHHHHccccccHHHHHHHHHHcccEEEccccccccccHHHHHHHHcccEEEEEEccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccccEEEcHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcc //