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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : cobP
DDBJ      :cobP         Bifunctional adenosylcobalamin biosynthesis protein cobP
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  458/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:173 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->172 1c9kB PDBj 3e-35 48.8 %
:RPS:PDB   8->172 1c9kC PDBj 2e-09 35.4 %
:RPS:SCOP  8->172 1c9kA  c.37.1.11 * 7e-51 44.9 %
:HMM:SCOP  7->172 1cbuA_ c.37.1.11 * 1.3e-53 50.9 %
:RPS:PFM   10->171 PF02283 * CobU 1e-44 57.8 %
:HMM:PFM   8->171 PF02283 * CobU 3.1e-65 52.8 163/167  
:BLT:SWISS 8->173 COBP_PSEDE 7e-65 68.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87330.1 GT:GENE cobP GT:PRODUCT Bifunctional adenosylcobalamin biosynthesis protein cobP GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1533221..1533742) GB:FROM 1533221 GB:TO 1533742 GB:DIRECTION - GB:GENE cobP GB:PRODUCT Bifunctional adenosylcobalamin biosynthesis protein cobP GB:PROTEIN_ID AAK87330.1 GB:DB_XREF GI:15156628 GB:GENE:GENE cobP LENGTH 173 SQ:AASEQ MTDKNRSVFILGGARSGKSRFAEELAGKAGGRLHYLATGRAWDDEMRDRISHHQERRGGEWTTHEAPVDIATVLQRLDSPDSVILIDCLTLWLTNLMMENADMETAFAELEAAIVSTRAKLILVSNEVGLGIVPENRMAREFRDHAGRLHQRVAAIAGEVYFVAAGLPLKMKG GT:EXON 1|1-173:0| BL:SWS:NREP 1 BL:SWS:REP 8->173|COBP_PSEDE|7e-65|68.1|166/174| BL:PDB:NREP 1 BL:PDB:REP 8->172|1c9kB|3e-35|48.8|164/180| RP:PDB:NREP 1 RP:PDB:REP 8->172|1c9kC|2e-09|35.4|164/165| RP:PFM:NREP 1 RP:PFM:REP 10->171|PF02283|1e-44|57.8|161/167|CobU| HM:PFM:NREP 1 HM:PFM:REP 8->171|PF02283|3.1e-65|52.8|163/167|CobU| GO:PFM:NREP 4 GO:PFM GO:0000166|"GO:nucleotide binding"|PF02283|IPR003203| GO:PFM GO:0043752|"GO:adenosylcobinamide kinase activity"|PF02283|IPR003203| GO:PFM GO:0043753|"GO:adenosylcobinamide-phosphate guanylyltransferase activity"|PF02283|IPR003203| GO:PFM GO:0051188|"GO:cofactor biosynthetic process"|PF02283|IPR003203| RP:SCP:NREP 1 RP:SCP:REP 8->172|1c9kA|7e-51|44.9|158/170|c.37.1.11| HM:SCP:REP 7->172|1cbuA_|1.3e-53|50.9|165/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 467 OP:NHOMOORG 459 OP:PATTERN -----------------------------------------1-------------------------- ----1-11111-1-11111-11--11111111-11112111111----------------11111111111----------1------11-1-111-----11--1-1-----------------11111111111111111121-111111111111111111111111111--11111-1111111----1-----------------1-------1111---11111121---------------------------------11---------------------------------------------1----------111-1111111-1-11111---111--1--1111111--111111--1111-1--------11111---1111111111111111-21111111-1--1111111111111111-111111111111111111-11-1111-------------------------------1--------111111-111111111111111111111--1111211111111-111111111----------111-1111-11-11111-111111111-----1-11-------------------1--------1-111-11-11111-1111111111131----11-------1---1--1111111111--11111111111111111-111--11-1111111111111111--211-11--1------------------------111-1---------------111111----1111111111111111111-------------11111111111--11111111------1---1111--------1---------------------------11-11-1-----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 165 STR:RPRED 95.4 SQ:SECSTR #######EEEEEcTTccHHHHHHHHHcccccEEEEEccccccHHHHccTTcEEcccGGGTccTTcccccEEEEcEcHHHHHHHHHHHHccTTcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHccEEEEEETTEEEEcc# DISOP:02AL 1-4| PSIPRED ccccccEEEEEccccccHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHcccccEEEEccccHHHHHHHHcccccEEEEEcHHHHHHHHHccccHHHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcEEEEEEEccEEEccc //