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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : crtB
DDBJ      :crtB         phytoene synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  76/915 : Eukaryota  62/199 : Viruses  0/175   --->[See Alignment]
a.128.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   27->142 2csdA PDBj 7e-05 16.1 %
:RPS:SCOP  6->242 1ezfA  a.128.1.2 * 4e-21 10.5 %
:HMM:SCOP  5->281 1ezfA_ a.128.1.2 * 2.2e-56 31.2 %
:RPS:PFM   19->224 PF00494 * SQS_PSY 4e-18 32.0 %
:HMM:PFM   14->261 PF00494 * SQS_PSY 1.1e-45 29.8 248/267  
:BLT:SWISS 10->237 CH038_BOVIN 6e-23 31.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87345.1 GT:GENE crtB GT:PRODUCT phytoene synthase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1547108..1547953) GB:FROM 1547108 GB:TO 1547953 GB:DIRECTION - GB:GENE crtB GB:PRODUCT phytoene synthase GB:PROTEIN_ID AAK87345.1 GB:DB_XREF GI:15156647 GB:GENE:GENE crtB LENGTH 281 SQ:AASEQ MEPTENLDVCLATLRDTDRDRYLACLLSPADKRNALAALYAFNAEIARIRDSVREALPGEVRMQWWRDLVDGNPHGDSQSHPVAAALLTTIEHYRLPRPVLGNMIEARIFDLYDDLFEDRNALEGYAGETASALIQLASLVLSAEDAAHSAEAAGHAGVAQAMAGMLLLMPLHRRRGQVYIPADMLAAAGLDRETFLAGQDRQRIGIAVEIFAAHALDHIEKARRATISKNLFAAYLPVALSGPVIAAARKAGAGVFDGDLQLSQLRRQWLLAKASFLKRF GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 10->237|CH038_BOVIN|6e-23|31.3|227/333| SEG 143->166|saedaahsaeaaghagvaqamagm| SEG 261->272|lqlsqlrrqwll| RP:PDB:NREP 1 RP:PDB:REP 27->142|2csdA|7e-05|16.1|112/516| RP:PFM:NREP 1 RP:PFM:REP 19->224|PF00494|4e-18|32.0|206/257|SQS_PSY| HM:PFM:NREP 1 HM:PFM:REP 14->261|PF00494|1.1e-45|29.8|248/267|SQS_PSY| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00494|IPR002060| GO:PFM GO:0016740|"GO:transferase activity"|PF00494|IPR002060| RP:SCP:NREP 1 RP:SCP:REP 6->242|1ezfA|4e-21|10.5|237/323|a.128.1.2| HM:SCP:REP 5->281|1ezfA_|2.2e-56|31.2|276/0|a.128.1.2|1/1|Terpenoid synthases| OP:NHOMO 157 OP:NHOMOORG 138 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--111111111111111111111111111111-11111111111111111111111111--11111-1111---------1---1111-----------------------------------------------------------------------------------------11-----------1--------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------- ------------111----1----------------------------------------------------------------------11-11-----1-111--12-1111111----11-11-21441-2221---1-11111---111--1112----111--113--11----6-----1--1-11---11-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 112 STR:RPRED 39.9 SQ:SECSTR ##########################HHHHHHHHHHHHTTcccHHHHHHH###HHHTTTcHHHHTTccHHHHHHHcTTccHHHcHHHHHHHHTccccHHHHHHHHH#HHccHHHHHTccHHHHHHHHHTTcccHHHHHHHHH########################################################################################################################################### DISOP:02AL 1-3| PSIPRED cccHHHHHHHHHHHHHccccHHHHHHHccHHHccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccc //