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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : csaA
DDBJ      :csaA         secretion chaperone
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  184/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.40.4
:113 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->113 2q2iA PDBj 9e-62 100.0 %
:RPS:PDB   4->92 1b70B PDBj 8e-20 18.4 %
:RPS:SCOP  4->112 1pxfA  b.40.4.4 * 6e-22 29.2 %
:HMM:SCOP  4->112 1gd7A_ b.40.4.4 * 1.8e-33 38.0 %
:HMM:PFM   15->111 PF01588 * tRNA_bind 6.1e-15 30.9 94/95  
:BLT:SWISS 9->112 CSAA_BACSU 2e-34 64.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87951.1 GT:GENE csaA GT:PRODUCT secretion chaperone GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2178576..2178917) GB:FROM 2178576 GB:TO 2178917 GB:DIRECTION - GB:GENE csaA GB:PRODUCT secretion chaperone GB:PROTEIN_ID AAK87951.1 GB:DB_XREF GI:15157355 GB:GENE:GENE csaA LENGTH 113 SQ:AASEQ MSGEISYADFEKVDIRVGTIVEAVPFPEARKPAIKVKIDFGPEIGIKKSSAQITVHYTPESLVGRQVLGVVNFPPRQIGPFRSEVLTLGFADANGDIVLAAVERPVPNGEKMC GT:EXON 1|1-113:0| BL:SWS:NREP 1 BL:SWS:REP 9->112|CSAA_BACSU|2e-34|64.4|104/110| BL:PDB:NREP 1 BL:PDB:REP 2->113|2q2iA|9e-62|100.0|112/112| RP:PDB:NREP 1 RP:PDB:REP 4->92|1b70B|8e-20|18.4|87/775| HM:PFM:NREP 1 HM:PFM:REP 15->111|PF01588|6.1e-15|30.9|94/95|tRNA_bind| RP:SCP:NREP 1 RP:SCP:REP 4->112|1pxfA|6e-22|29.2|106/111|b.40.4.4| HM:SCP:REP 4->112|1gd7A_|1.8e-33|38.0|108/109|b.40.4.4|1/1|Nucleic acid-binding proteins| OP:NHOMO 220 OP:NHOMOORG 198 OP:PATTERN 11-1--1-----------------1----------111----------1--1---------111---- 1---------------------------------------------------------------------------------1-----1111-111---2-2211211-1-----------------1------2----------1---------11------------1-------------11-11---111222221122111112-11111112--111--------1--------------------------------------------------------------------------------------------11--1111111-1-1-------1-1----1--------1-----1-1----21----------111--------11111111111-11-11-1-11--1111111111111-1111111111111--------111-1-11--------------11-------------11--1--11----------------------------------------1---------2--1--------------11-1--2211222211--------------1-------------1--------------11--------------------------11-------------------------------------------------------111----------------1------------------------------1111--------------------111111------1111----1---------------------1---------------------------1----11-------------------------------------11---------- ----1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 112 STR:RPRED 99.1 SQ:SECSTR #ccEEEEcccccTTEEEEEEEEEEEETTTTEccEEEEEEcccEEEEEEccccccTcEEEEEcTTcccccccccccEEccccEEccEEccHHHcccEEEEccccTTccTTcccc PSIPRED ccccccHHHHHEEEEEEEEEEEEEEcccccccEEEEEEEEcccccEEEEEEccHHcccHHHHcccEEEEEEccccHHcccEEEEEEEEEEEccccEEEEEccccccccccccc //