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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : cscA
DDBJ      :cscA         sucrose hydrolase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  241/915 : Eukaryota  66/199 : Viruses  0/175   --->[See Alignment]
b.29.1b.67.2
:543 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   91->505 1uypA PDBj 3e-39 33.9 %
:RPS:PDB   92->515 2ac1A PDBj 4e-50 25.9 %
:RPS:SCOP  92->403 1uypA2  b.67.2.3 * 2e-36 32.2 %
:RPS:SCOP  439->542 1y4wA1  b.29.1.19 * 5e-10 20.2 %
:HMM:SCOP  82->404 1y4wA2 b.67.2.3 * 1.7e-66 38.0 %
:HMM:SCOP  404->542 1uypA1 b.29.1.19 * 1.1e-09 25.4 %
:RPS:PFM   93->400 PF00251 * Glyco_hydro_32N 4e-42 41.2 %
:HMM:PFM   93->401 PF00251 * Glyco_hydro_32N 1.8e-61 32.2 292/308  
:HMM:PFM   489->507 PF08244 * Glyco_hydro_32C 0.0002 52.6 19/86  
:BLT:SWISS 92->541 CSCA_ECOLX 7e-41 36.9 %
:PROS 93->106|PS00609|GLYCOSYL_HYDROL_F32

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86749.1 GT:GENE cscA GT:PRODUCT sucrose hydrolase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(931736..933367) GB:FROM 931736 GB:TO 933367 GB:DIRECTION - GB:GENE cscA GB:PRODUCT sucrose hydrolase GB:PROTEIN_ID AAK86749.1 GB:DB_XREF GI:15155945 GB:GENE:GENE cscA LENGTH 543 SQ:AASEQ MWLKAKKDAEAGAVSFSNQNGKFAEVSSVNTEEFSFRIYQVFGGGHVELSYDTVTTAVSVIYWFTASDVLETGITVVHTKPDNAAPELPGSYHFRPPFGWMNDPNGFGRFEGRPHLFYQHYSHGLRWNTMHWGHAVSSDYLRWRHLPIFLFPSEDLTTRPDKRGGAYSGSTIPLVEGSGIRVFFTEQVQDRIPEQQIQLTATSSDLIMAGQADVILAHRPDGQGLTPDFRDPYVFRGPDGLWKMLLGSQSDGGGVILLYETLDPTAASGWTYVGKLWVETRYKTTAIECPCLLPLDGPANARSTRWVLIYGLMHSEDPETGRKNLTMADVGWFDGKVFTKEFGQELDFGTDNYAFQAFLDGDSIIGIGWLANWADANPEIDFPTSMTLPRRIHYANGELLTPPIGAAESLRSHILDRTRLAAGERVTFINGAVEILIELASSDAAFELALDHPTVTLGLVSDETGLWIRHEDGRDGASPHYIAKGARASRIRIFLDYGSIEVFANRGRYVGTKRIEGFEPVRSALLRADPGAVVHATSWALKP GT:EXON 1|1-543:0| BL:SWS:NREP 1 BL:SWS:REP 92->541|CSCA_ECOLX|7e-41|36.9|420/477| PROS 93->106|PS00609|GLYCOSYL_HYDROL_F32|PDOC00532| BL:PDB:NREP 1 BL:PDB:REP 91->505|1uypA|3e-39|33.9|375/432| RP:PDB:NREP 1 RP:PDB:REP 92->515|2ac1A|4e-50|25.9|406/537| RP:PFM:NREP 1 RP:PFM:REP 93->400|PF00251|4e-42|41.2|289/301|Glyco_hydro_32N| HM:PFM:NREP 2 HM:PFM:REP 93->401|PF00251|1.8e-61|32.2|292/308|Glyco_hydro_32N| HM:PFM:REP 489->507|PF08244|0.0002|52.6|19/86|Glyco_hydro_32C| RP:SCP:NREP 2 RP:SCP:REP 92->403|1uypA2|2e-36|32.2|283/294|b.67.2.3| RP:SCP:REP 439->542|1y4wA1|5e-10|20.2|104/164|b.29.1.19| HM:SCP:REP 82->404|1y4wA2|1.7e-66|38.0|308/0|b.67.2.3|1/1|Arabinanase/levansucrase/invertase| HM:SCP:REP 404->542|1uypA1|1.1e-09|25.4|130/138|b.29.1.19|1/1|Concanavalin A-like lectins/glucanases| OP:NHOMO 488 OP:NHOMOORG 310 OP:PATTERN ------------------------1--1--1------------------------------------- 111--1--111--------------------------------1-11-----455-------1---1----21112111---------2231-1------1--111-1----------------------------111-------------------------------------------------11--23111111---11-1--31441311--1---12-------21---1--------------122--11-11-111--1111111----111111132222222222222111111111-1112221112223---34-------1-1-1---112---1---1------------11----3--1---------2--------------------------1----------11-211121--------------------------221-----------------------------------1--1-----111111-1111---11111-1-1---------11-------------------------------------------------------------------------------------------113-----1-1--------------------------------1111-13-11---2-2--1--122-1111-1------222111-1----------------2--11111--1-----------------------------1-1111-----1--1----------1------1--------1111111-1111-----11111----------------------1---------------------1-------------1-----------1-111--- --------A4-----111-1431-311-------------------21--344A1221-1211-11113---1--111111-----11----1-1-111-1-1-1--3----------------------------------------------------------2---1-----43-----327A68283--2213- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 501 STR:RPRED 92.3 SQ:SECSTR #########################################EEETGGGTTcHHHHHHHHHEEEEEEEEEEEEEccccTTcccccccGGGcccccccccEEEEEEEEEEEETTEEEEEEEEcTTcccccccEEEEEEEccccccEEEEEEEccccTcccTGGGTTcEEEEEEEEcTTccEEEEEEEEcTTcccEEcEEEEEEEEccTTEEcTTcccccccTTTcccTTcEEcccccEcTTccEEEEEEEEETTEEEEEEEEEcccccTTTcEEccccccEEEETcccEEEEEEEEEEcccccccTTccEEEEEEEEETTTETTETEEEEEEEEEETTTTEcTTccccccccccEEEEEEEETTTEEEEEEEcccccHHHHHTEEcEEcccEEEcTTcccEEEEEcGGGGGGccEEEEEEEEcTTEEEEcccccEEEEEEcccGGGcEEccTTcccHHHHHHHTcTEEEEEEcTTccccEEEEEEEccTTccEEEEEETTEEEEEETTTTEEEEEEcGGTcccEEEEEEcccccEEEEEEEEEc# DISOP:02AL 74-84| PSIPRED cEEEEEEcccccEEEEEcccccccEEEEEEccccccEEEEEccccEEEEEccccEEEEEEEEEccccccccccHHHHHccccccccccccEEEEEccccccccccccEEEccEEEEEEEEcccccccccEEEEEEEEcccEEEEEcccEEcccccccccccccccEEEEEEEEEccccEEEEEEccccccccccEEEEEEEEccccEEEcccccccccccccccccccccccEEEEccccEEEEEEEEEEccccEEEEEEcccccccHHEEEEccccccccccccEEEcccEEEEEccccccccEEEEEEEEccccccccccccEEEEEEEEEcccEEccccccEEEcccccccEEEEEccccEEEEEEEcccccccccccccccccccEEEEEEccEEEEEcHHHHHHHcccEEEccEEEcccccccccccEEEEEEEcccccEEEEEEEcccEEEEEEEcccEEEEEEcccccccccEEEcccccEEEEEEEEEEEEEEEEEcccEEEEEEEEcccccccEEEEEEcccEEEEEEEEcccc //