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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ctpB
DDBJ      :ctpB         components of type IV pilus, prepilin peptidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:170 amino acids
:PSIPRED
:HMM:PFM   8->108 PF01478 * Peptidase_A24 9.5e-17 33.3 99/106  
:BLT:SWISS 45->152 LEP4_PSEAE 6e-05 43.3 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86041.1 GT:GENE ctpB GT:PRODUCT components of type IV pilus, prepilin peptidase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(229013..229525) GB:FROM 229013 GB:TO 229525 GB:DIRECTION - GB:GENE ctpB GB:PRODUCT components of type IV pilus, prepilin peptidase GB:PROTEIN_ID AAK86041.1 GB:DB_XREF GI:15155114 GB:GENE:GENE ctpB LENGTH 170 SQ:AASEQ MIVAAIFLILPLCLCFAALNDLFSMTIPNVITVVLLLSFAFIAPFAGMDFQTFGLSLAGGLIVFLGCFALFAANVMGGGDAKLLTGAAVWYGFNISLVEFLLAVTLVGGALTVGILLLRSRSQEIMAFGIPIPDSLMVAQKIPYGIGIAIAGLLTYGEAPLVKAAIASIL GT:EXON 1|1-170:0| BL:SWS:NREP 1 BL:SWS:REP 45->152|LEP4_PSEAE|6e-05|43.3|90/290| TM:NTM 5 TM:REGION 2->24| TM:REGION 28->49| TM:REGION 54->76| TM:REGION 98->119| TM:REGION 135->157| HM:PFM:NREP 1 HM:PFM:REP 8->108|PF01478|9.5e-17|33.3|99/106|Peptidase_A24| OP:NHOMO 37 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111---------11--1----1----------1-111112111111111111111122----1--------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHc //