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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ctpG
DDBJ      :ctpG         component of type IV pilus
Swiss-Prot:             

Homologs  Archaea  64/68 : Bacteria  411/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:491 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   73->430 2oap1 PDBj 1e-24 31.7 %
:RPS:PDB   284->456 1dmaB PDBj 1e-31 10.2 %
:RPS:SCOP  142->381 1p9rA  c.37.1.11 * 5e-34 24.0 %
:HMM:SCOP  115->442 1p9rA_ c.37.1.11 * 8e-67 33.4 %
:RPS:PFM   102->172 PF03323 * GerA 9e-04 31.4 %
:RPS:PFM   148->380 PF00437 * GSPII_E 3e-22 37.2 %
:HMM:PFM   135->412 PF00437 * GSPII_E 2.7e-81 38.6 267/282  
:BLT:SWISS 136->365 Y781_METJA 2e-39 43.4 %
:PROS 267->273|PS00227|TUBULIN
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86036.2 GT:GENE ctpG GT:PRODUCT component of type IV pilus GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(222917..224392) GB:FROM 222917 GB:TO 224392 GB:DIRECTION - GB:GENE ctpG GB:PRODUCT component of type IV pilus GB:PROTEIN_ID AAK86036.2 GB:DB_XREF GI:159139544 GB:GENE:GENE ctpG LENGTH 491 SQ:AASEQ MFGKRGPEGPARSTKLEPVAPAVSMQVATASEPRSPATDTLEPGQSPVTRQVTTGAPLSQKKRARTEDYYNTKSQVFSALIDTIDLSQLAKLDAESAREEIRDIVNDIITIKNFAMSIAEQEELLEDICNDVLGYGPLEPLLARDDIADIMVNGSGQTFIEVGGKTIESDIRFRDNAQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLAIDGPALTIRKFKRDKLTLDQLVRFGAITPEGATLLKIIGRVRCNVVISGGTGSGKTTLLNCLTSFIDKDERVITCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIVVGEVRGPEVFDLLQAMNTGHDGSMGTLHANTPRECLSRIESMIAMGGFTLPAKTVREIISGSIDVVIQAARLRDGSRRITQITEVIGMEGDVIVTQDLMRYEIEGEDAQGRLIGRHVSTGISKPHFWDRARYYGEDKRLAAALDEMEKSS GT:EXON 1|1-491:0| BL:SWS:NREP 1 BL:SWS:REP 136->365|Y781_METJA|2e-39|43.4|228/721| PROS 267->273|PS00227|TUBULIN|PDOC00199| SEG 267->276|sggtgsgktt| BL:PDB:NREP 1 BL:PDB:REP 73->430|2oap1|1e-24|31.7|331/481| RP:PDB:NREP 1 RP:PDB:REP 284->456|1dmaB|1e-31|10.2|166/189| RP:PFM:NREP 2 RP:PFM:REP 102->172|PF03323|9e-04|31.4|70/464|GerA| RP:PFM:REP 148->380|PF00437|3e-22|37.2|223/273|GSPII_E| HM:PFM:NREP 1 HM:PFM:REP 135->412|PF00437|2.7e-81|38.6|267/282|GSPII_E| GO:PFM:NREP 5 GO:PFM GO:0009847|"GO:spore germination"|PF03323|IPR004995| GO:PFM GO:0016021|"GO:integral to membrane"|PF03323|IPR004995| GO:PFM GO:0005524|"GO:ATP binding"|PF00437|IPR001482| GO:PFM GO:0005622|"GO:intracellular"|PF00437|IPR001482| GO:PFM GO:0006810|"GO:transport"|PF00437|IPR001482| RP:SCP:NREP 1 RP:SCP:REP 142->381|1p9rA|5e-34|24.0|229/378|c.37.1.11| HM:SCP:REP 115->442|1p9rA_|8e-67|33.4|302/401|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 993 OP:NHOMOORG 477 OP:PATTERN 332123434444443323222224423514641113322222562224-663512222222-22-21- 4-42611111111111111-11--111111111111112222444222223-454224222251111342211111111141-------------------------------------------11---1121-243465---21--------------------------------------------15---2-22-1--111-1-----1-1---------------22------------------------------------------------------------------------------------------1-11------2--2-3-11----1-2--2231-2-241--1-21212--1--36225-4223-13173154311211111111114-111113227651444673554553172213121211221--------264--1-111111111111111111111111111111-2354-133154333351-22233633333333452345--55311122333233-11-111----------212--3---21-1-11111-2-2----1121112111----1--2--11-2232313-1---2311-----1---1--1---11---1-11-12----1-1---------2--2-----------1---------------------21--1-----1---1--------1-----1-111121111211--2------1112-1-11111-111-------1----------1-12211111----1-111---------11323-----423333221111---2--1----------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 384 STR:RPRED 78.2 SQ:SECSTR ########################################################################HHHHHHHHHHHHHHTTcHHHHcTTcHHHHHHHHHHHHccTTTTHHccHHHHHHHHHHHTTTccGGGHHHHHcTTEEEEEEccTTcccEEEETTTEEEEEcccccHHHHHHHHHHHHHTTccccTTccEEEEEETTTEEEEEccccccTTccEEEEEEcccccccHHHHHHTTcccHHHHHHHHHHHHTTccEEEEEcTTccHHHHHHHHHTccccccccccTTcccTccHHHHHHHEEEcHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHccccccccTTcTTcEEcccHHHHTTccccccEEEEEEEEETTcGGGEEEccccTTcHHHHHHHHHHHTccccccccEEEEccccccccEEEEcHHHHTTcEEEccccccTTcc################################### DISOP:02AL 1-43,94-94,489-492| PSIPRED cccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHccccccEEEEEccccEEEEEccEEEEEccEEccHHHHHHHHHHHHHHHcccccccccEEEEEEccccEEEEEEccccccccEEEEEccccccccHHHHHHcccccHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHccccccEEEEEcccccccccccEEEEEEEEccccccccccHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHcccccccHHHHHHHHHHcEEEEEEEEEccccccEEEEEEEEEEcccccccHHHHHHHccccccccHHEEEEEEEcccccHHHHHHHHHHcHHHHHHHHHHHHHHcc //