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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ctpI
DDBJ      :ctpI         components of type IV pilus
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  165/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:328 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   176->286 3c1qA PDBj 6e-10 13.9 %
:HMM:PFM   189->317 PF00482 * GSPII_F 1.3e-22 31.1 122/124  
:BLT:SWISS 150->286 Y779_METJA 3e-06 25.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86034.1 GT:GENE ctpI GT:PRODUCT components of type IV pilus GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(220902..221888) GB:FROM 220902 GB:TO 221888 GB:DIRECTION - GB:GENE ctpI GB:PRODUCT components of type IV pilus GB:PROTEIN_ID AAK86034.1 GB:DB_XREF GI:15155105 GB:GENE:GENE ctpI LENGTH 328 SQ:AASEQ MTGDLFSRLTDPQTIIAILVTLAVFATLYTLIMPFLERKDLAKRMKAVSSERELIRSRERERLATVTRDGRTSLRGNNNKSARRIVEKFNLREALADQNTMNKLRAAGFRSQNALNTFLAARFVLPFIFLAVAFTWVFVLGNLADKAFVVRLMAVLVFGYIGFYAPNIYVSNRMTKRQASIKRAWPDALDLMLICIESGVSMESAMRRVAEEMGEQSPELAEEMILTTAELSFLQDRRTALENFGMRTQLDGVKSVVQALIQAERYGTPLAQALRVLAQEGRDERMNEAEKKAAALPPKLTVPMIIFFLPVLIAVILGPAGIRVADTF GT:EXON 1|1-328:0| BL:SWS:NREP 1 BL:SWS:REP 150->286|Y779_METJA|3e-06|25.6|129/299| TM:NTM 5 TM:REGION 13->35| TM:REGION 114->136| TM:REGION 142->164| TM:REGION 184->206| TM:REGION 297->319| SEG 49->63|sserelirsrererl| SEG 288->300|eaekkaaalppkl| RP:PDB:NREP 1 RP:PDB:REP 176->286|3c1qA|6e-10|13.9|101/111| HM:PFM:NREP 1 HM:PFM:REP 189->317|PF00482|1.3e-22|31.1|122/124|GSPII_F| OP:NHOMO 215 OP:NHOMOORG 165 OP:PATTERN -------------------------------------------------------------------- 1-3-------------------------------------------------133-1-----1-------1---------1--------------------------------------------11----121--11112---11--------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------1------111--1-----------21112------121211111111----------1-111113112321111121311222--12111-1111111--------111--1--------------------------------1222------222212--111--1122221221-1211--111----1--1111-----1------------11--1---11-1-1-111-2-1----1111111-11---------------------------11---------1------1----1-11-11----------------1------------------------------------11-------------------------------------------------------1--1-----------------------------------------------------1-222-----12323------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 31.7 SQ:SECSTR ###############################################################################################################################################################################ccccccHHHHHHHHHHHHHHHHTT#cHHHHHHHHHHTcc##ccHHHHHHHHHHHHHHTTccHHHHHTTcTTTccH####cHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHH########################################## DISOP:02AL 1-2, 46-102, 286-295| PSIPRED cccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcHHHHccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //