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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : dapA.1
DDBJ      :dapA         dihydrodipicolinate synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  236/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->288 2r8wB PDBj e-121 100.0 %
:RPS:PDB   3->288 3cprA PDBj 1e-39 21.9 %
:RPS:SCOP  5->288 1fdyA  c.1.10.1 * 1e-36 17.2 %
:HMM:SCOP  4->298 1dhpA_ c.1.10.1 * 3.4e-72 39.6 %
:RPS:PFM   6->285 PF00701 * DHDPS 1e-17 32.4 %
:HMM:PFM   5->295 PF00701 * DHDPS 2.1e-49 33.9 286/289  
:BLT:SWISS 13->288 DAPA_CORA7 3e-17 30.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86704.2 GT:GENE dapA.1 GT:PRODUCT dihydrodipicolinate synthase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 890200..891108 GB:FROM 890200 GB:TO 891108 GB:DIRECTION + GB:GENE dapA GB:PRODUCT dihydrodipicolinate synthase GB:PROTEIN_ID AAK86704.2 GB:DB_XREF GI:159139829 GB:GENE:GENE dapA LENGTH 302 SQ:AASEQ MATRFKGLSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIKMPLPADADYAGELARLRPKLSDDFAIGYSGDWGCTDATLAGGDTWYSVVAGLLPVPALQLMRAAQAGNAEEAKRLDATFQPLWALFKEFGSIRVIYAAANILSLTVSEPPRPILPLTSAERQRVEEALEALSALETAP GT:EXON 1|1-302:0| BL:SWS:NREP 1 BL:SWS:REP 13->288|DAPA_CORA7|3e-17|30.8|266/302| SEG 54->71|ltreerrraieaaatilr| SEG 86->106|deavalakdaeaagadallla| SEG 123->134|aavagatalpla| SEG 289->301|eealealsaleta| BL:PDB:NREP 1 BL:PDB:REP 2->288|2r8wB|e-121|100.0|283/294| RP:PDB:NREP 1 RP:PDB:REP 3->288|3cprA|1e-39|21.9|278/301| RP:PFM:NREP 1 RP:PFM:REP 6->285|PF00701|1e-17|32.4|272/288|DHDPS| HM:PFM:NREP 1 HM:PFM:REP 5->295|PF00701|2.1e-49|33.9|286/289|DHDPS| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00701|IPR002220| GO:PFM GO:0016829|"GO:lyase activity"|PF00701|IPR002220| RP:SCP:NREP 1 RP:SCP:REP 5->288|1fdyA|1e-36|17.2|279/292|c.1.10.1| HM:SCP:REP 4->298|1dhpA_|3.4e-72|39.6|288/0|c.1.10.1|1/1|Aldolase| OP:NHOMO 275 OP:NHOMOORG 238 OP:PATTERN -------------------------------------------------------------------- -----11111111-211-------1------11----11-----1---1---1--111--------1-----------1--11------------------------------------------------1-1---------------------11-----------------------------------11----------------111------11--1-------21--------------------1---------------------------------------------------------------------1------------------------1---------1----------1-----------------2-----1--------------2-11-112-1-1--211-221322111--------------------------11-------11-----11--111111111---------11----3332321111111--11111121211-----1------1--1111-----1-1-------1--1-1----------------------------1------------------------------111-1--1--1-----1---------1-------1--------12311111111111111-111111111111111111122222-11----------------11111111--111111111111----11111-1----111---11--------1111-11------111-11-22-22211111---------1-111-----1-1---1-----------------------------------------------------------1---1-111--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 288 STR:RPRED 95.4 SQ:SECSTR cTHHHccEEEEccccccTTccccHHHHHHHHHHHHHTTccEEEEccTTTTTTTccHHHHHHHHHHHHHHHTTTcEEEEEcccccHHHHHHHHHHHHHTTccEEEEEccccccccHHHHHHHHHHHHHHccccEEEEEcHHHHcccccHHHHHHHTTcTTEEEEEEcccccHHccccHHHHHHHHHHHccEEEEccGGGHHHHHHTccEEEEcGGGTcHHHHHHHHHHHHHTcHHHHHHHHHHTHHHHHHHHHHcHHHHHHHHHHHTTcccccccTTcccccHHHHHHH############## DISOP:02AL 1-2| PSIPRED ccccccEEEEEEcccccccccccHHHHHHHHHHHHHccccEEEEccccccHHHccHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccEEEccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHcccc //