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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : dnaJ.1
DDBJ      :dnaJ         molecular chaperone, DnaJ family
Swiss-Prot:DNAJ_AGRT5   RecName: Full=Chaperone protein dnaJ;

Homologs  Archaea  26/68 : Bacteria  910/915 : Eukaryota  197/199 : Viruses  2/175   --->[See Alignment]
a.2.3b.4.1d.227.1g.54.1
:377 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->75 1xblA PDBj 7e-21 55.4 %
:BLT:PDB   138->218 1exkA PDBj 5e-30 68.4 %
:BLT:PDB   209->350 2qldA PDBj 1e-16 31.2 %
:RPS:PDB   2->75 1bq0A PDBj 3e-23 66.2 %
:RPS:PDB   138->375 1cmwA PDBj 2e-57 12.5 %
:RPS:SCOP  2->75 1bq0A  a.2.3.1 * 1e-23 66.2 %
:RPS:SCOP  138->215 1exkA  g.54.1.1 * 1e-19 65.4 %
:RPS:SCOP  215->364 2d7vA1  d.227.1.1 * 1e-34 13.5 %
:HMM:SCOP  1->112 1gh6A_ a.2.3.1 * 4.6e-31 52.8 %
:HMM:SCOP  122->261 1c3gA1 b.4.1.1 * 1.2e-21 38.8 %
:HMM:SCOP  262->350 1c3gA2 b.4.1.1 * 6.2e-26 46.1 %
:RPS:PFM   5->66 PF00226 * DnaJ 5e-22 66.1 %
:RPS:PFM   138->211 PF00684 * DnaJ_CXXCXGXG 5e-22 63.5 %
:RPS:PFM   249->343 PF01556 * DnaJ_C 2e-28 52.6 %
:HMM:PFM   215->256 PF01556 * DnaJ_C 1.1e-05 26.2 42/101  
:HMM:PFM   249->348 PF01556 * DnaJ_C 5.4e-37 45.0 100/101  
:HMM:PFM   5->67 PF00226 * DnaJ 2.9e-30 66.7 63/64  
:HMM:PFM   138->211 PF00684 * DnaJ_CXXCXGXG 1.3e-19 41.9 74/79  
:BLT:SWISS 1->377 DNAJ_AGRT5 0.0 100.0 %
:PROS 47->66|PS00636|DNAJ_1
:REPEAT 2|221->265|299->344
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK85941.1 GT:GENE dnaJ.1 GT:PRODUCT molecular chaperone, DnaJ family GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(124981..126114) GB:FROM 124981 GB:TO 126114 GB:DIRECTION - GB:GENE dnaJ GB:PRODUCT molecular chaperone, DnaJ family GB:PROTEIN_ID AAK85941.1 GB:DB_XREF GI:15154994 GB:GENE:GENE dnaJ LENGTH 377 SQ:AASEQ MAKADFYETLGVSKTADEKELKSAFRKLAMKFHPDKNPDDADSERKFKEINEAYETLKDPQKRAAYDRFGHAAFENGGMGGGGMGGGGFANGGFSDIFEDIFGEMMGGGRARRSSGGRERGADLRYNMEITLEEAFAGKTAQIRVPTSITCDVCSGSGAKPGTQPKTCATCQGSGRVRAAQGFFSVERTCPTCHGRGQTISDPCGKCHGQGRVTEERSLSVNIPSGIEDGTRIRLQGEGEAGMRGGPAGDLYIFLSVRPHEFFQRDGADLYCTVPISMTTAALGGTFDVTTLDGTKSRVTVPEGTQPGKQFRLKGKGMPVLRSAQTGDLYIQIQIETPQKLSKRQRELLQEFEQLSSKENNPESTGFFARMKEFFDG GT:EXON 1|1-377:0| SW:ID DNAJ_AGRT5 SW:DE RecName: Full=Chaperone protein dnaJ; SW:GN Name=dnaJ; OrderedLocusNames=Atu0121; ORFNames=AGR_C_192; SW:KW Chaperone; Complete proteome; Cytoplasm; DNA replication;Metal-binding; Repeat; Stress response; Zinc; Zinc-finger. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->377|DNAJ_AGRT5|0.0|100.0|377/377| GO:SWS:NREP 4 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0006950|"GO:response to stress"|Stress response| PROS 47->66|PS00636|DNAJ_1|PDOC00553| NREPEAT 1 REPEAT 2|221->265|299->344| SEG 76->94|nggmggggmggggfanggf| SEG 103->122|gemmgggrarrssggrerga| BL:PDB:NREP 3 BL:PDB:REP 2->75|1xblA|7e-21|55.4|74/75| BL:PDB:REP 138->218|1exkA|5e-30|68.4|79/79| BL:PDB:REP 209->350|2qldA|1e-16|31.2|138/171| RP:PDB:NREP 2 RP:PDB:REP 2->75|1bq0A|3e-23|66.2|74/77| RP:PDB:REP 138->375|1cmwA|2e-57|12.5|216/817| RP:PFM:NREP 3 RP:PFM:REP 5->66|PF00226|5e-22|66.1|62/63|DnaJ| RP:PFM:REP 138->211|PF00684|5e-22|63.5|74/78|DnaJ_CXXCXGXG| RP:PFM:REP 249->343|PF01556|2e-28|52.6|95/95|DnaJ_C| HM:PFM:NREP 4 HM:PFM:REP 215->256|PF01556|1.1e-05|26.2|42/101|DnaJ_C| HM:PFM:REP 249->348|PF01556|5.4e-37|45.0|100/101|DnaJ_C| HM:PFM:REP 5->67|PF00226|2.9e-30|66.7|63/64|DnaJ| HM:PFM:REP 138->211|PF00684|1.3e-19|41.9|74/79|DnaJ_CXXCXGXG| GO:PFM:NREP 6 GO:PFM GO:0031072|"GO:heat shock protein binding"|PF00226|IPR001623| GO:PFM GO:0006457|"GO:protein folding"|PF00684|IPR001305| GO:PFM GO:0031072|"GO:heat shock protein binding"|PF00684|IPR001305| GO:PFM GO:0051082|"GO:unfolded protein binding"|PF00684|IPR001305| GO:PFM GO:0006457|"GO:protein folding"|PF01556|IPR002939| GO:PFM GO:0051082|"GO:unfolded protein binding"|PF01556|IPR002939| RP:SCP:NREP 3 RP:SCP:REP 2->75|1bq0A|1e-23|66.2|74/77|a.2.3.1| RP:SCP:REP 138->215|1exkA|1e-19|65.4|78/79|g.54.1.1| RP:SCP:REP 215->364|2d7vA1|1e-34|13.5|141/155|d.227.1.1| HM:SCP:REP 1->112|1gh6A_|4.6e-31|52.8|108/0|a.2.3.1|1/1|Chaperone J-domain| HM:SCP:REP 122->261|1c3gA1|1.2e-21|38.8|80/80|b.4.1.1|1/2|HSP40/DnaJ peptide-binding domain| HM:SCP:REP 262->350|1c3gA2|6.2e-26|46.1|89/90|b.4.1.1|2/2|HSP40/DnaJ peptide-binding domain| OP:NHOMO 5458 OP:NHOMOORG 1135 OP:PATTERN ------------------------11121111111--------2222111212--------111--12 2222322222222222222-22222222222222222253233322222222333233222222332322222222223222222222222212111112321323323211111111111111111111111121333332222244543345434333333334355552333222323422212211211111111111111111111111111111121221111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111121111111111211221131222212212111111113222222422222233232222222222222222222124224232232142223333333322222112111111122222222222222331111111111111111111111111111112233222222211112111111133111111113231222221311222223213343112112222222222325233232222422222222323222222223562212222222222222222222222221111212122311111122111111111111-1221211111121111112222222222-22222222222222222222221111222222222222222222222222211211111111111111122222222222223111121111-11111222221222221111122221222213232222222222222111111111112222222222222211221111112221121121111111-11111421111112111111111111111221 HCBBGGF-qIJ6KML9DECDHHHHFCFDCBDCDDGFFIEGAIGGFGFFDCBBCDDADABFDE9CEABA5ADCC9CCC7CBBDADBCAA-EKBDEDCC9999BCOKJ1FkCadnXVZNHGGFIOGgWDbF**S1WRYEGCHaDLaMCHFGCQGFhGLMNLFKLJKGFDaHMRGFRB9OJL*FFDKIedj*DoVKFOLRJW --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1- STR:NPRED 368 STR:RPRED 97.6 SQ:SECSTR cccccHHHHHTccTTccHHHHHHHHHHHHHHTcTTTccccTTHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccTTT##EcTTTccEEEEcEEEEEEEEEETTccEEEccccccccHHHHHcccccccccccccccccccccccccccHHHHTTTTTTTTTTTccHHHHHHHHHHHHHHHHHHTccTTTcccTTTcccccEEEcccccccccEEEcccGGGccTTcHHHHHHHHTccccTTEEEEEEEETTHHHHHHHHHHTcHHHHHHHHHTccHHHHHHHHHHccTTcccTcEETccGGGccHHTcTHHHHHHHHHHHTTccccHHHHHHHccccHHHHHHHHHHHHHH#####HHHcHHHHHHHHHHHHHH## DISOP:02AL 69-85, 103-124, 153-182, 351-367| PSIPRED ccccccHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcHHHHHcccEEEEEEcccEEcccccccccccccccEEcccccccccEEEccEEEEEEEEcccccccccEEEcccccccccEEEEccEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEEccccEEEcccEEEEEEcccHHHHHcccEEEEEcccccEEEEEEccccccccEEEEcccccccccccccccEEEEEEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHcc //