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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : dnaJ.2
DDBJ      :dnaJ         molecular chaperone, DnaJ family
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  668/915 : Eukaryota  196/199 : Viruses  1/175   --->[See Alignment]
a.2.3b.4.1d.227.1
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->65 2dn9A PDBj 8e-14 47.6 %
:RPS:PDB   3->77 2ctwA PDBj 2e-18 34.7 %
:RPS:PDB   207->361 1c3gA PDBj 6e-16 17.4 %
:RPS:SCOP  2->74 1bq0A  a.2.3.1 * 5e-17 43.8 %
:RPS:SCOP  232->367 2d7vA1  d.227.1.1 * 8e-12 8.3 %
:HMM:SCOP  1->76 1iurA_ a.2.3.1 * 9.8e-20 44.6 %
:HMM:SCOP  202->276 1nltA1 b.4.1.1 * 9.8e-09 25.3 %
:HMM:SCOP  277->363 1c3gA2 b.4.1.1 * 1.6e-13 32.2 %
:RPS:PFM   3->64 PF00226 * DnaJ 4e-10 46.8 %
:RPS:PFM   191->268 PF01556 * DnaJ_C 2e-04 28.2 %
:HMM:PFM   207->270 PF01556 * DnaJ_C 1.3e-08 31.2 64/101  
:HMM:PFM   264->354 PF01556 * DnaJ_C 6e-20 34.1 91/101  
:HMM:PFM   3->65 PF00226 * DnaJ 1.3e-22 50.8 63/64  
:BLT:SWISS 2->326 DNAJ_CLOPH 7e-19 33.0 %
:PROS 45->64|PS00636|DNAJ_1
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86567.2 GT:GENE dnaJ.2 GT:PRODUCT molecular chaperone, DnaJ family GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(755159..756274) GB:FROM 755159 GB:TO 756274 GB:DIRECTION - GB:GENE dnaJ GB:PRODUCT molecular chaperone, DnaJ family GB:PROTEIN_ID AAK86567.2 GB:DB_XREF GI:159139765 GB:GENE:GENE dnaJ LENGTH 371 SQ:AASEQ MRDPYSILGVKRDARHEDIKAAWRTKAKTVHPDANRDDPDASARFAEIGQAYDLLKDSKKRDLYDQARQAAEKKKRGETIMQQREAAREAAERAKAAEKLMEELARADARNRAQTGQKTDAKPETAEDIVERIFGADAQNDPKVQQAAEAAKAAASAAKGDIPAAGDTAQSAAGDDRTAPASLAVNLFNALVRRFRPAQPAAEKVPDITAEATVTVADLLEHKWVTLQLADEREIRFQLEAGMADGHIVRLKGQGLKLPNLARGDLAVTLLAARDDAFSLRGFDIHTTLPISLSDAVLGCEAKVATPLGEENITIPAWSGSDRVLRLAGKGLADGKGGSGDLVIELRIVLLEKPDEKVTDLMRHMREGLYL GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 2->326|DNAJ_CLOPH|7e-19|33.0|306/381| PROS 45->64|PS00636|DNAJ_1|PDOC00553| COIL:NAA 44 COIL:NSEG 1 COIL:REGION 68->111| SEG 81->107|mqqreaareaaerakaaeklmeelara| SEG 147->165|aaeaakaaasaakgdipaa| SEG 327->341|lagkgladgkggsgd| BL:PDB:NREP 1 BL:PDB:REP 3->65|2dn9A|8e-14|47.6|63/79| RP:PDB:NREP 2 RP:PDB:REP 3->77|2ctwA|2e-18|34.7|75/109| RP:PDB:REP 207->361|1c3gA|6e-16|17.4|155/170| RP:PFM:NREP 2 RP:PFM:REP 3->64|PF00226|4e-10|46.8|62/63|DnaJ| RP:PFM:REP 191->268|PF01556|2e-04|28.2|78/95|DnaJ_C| HM:PFM:NREP 3 HM:PFM:REP 207->270|PF01556|1.3e-08|31.2|64/101|DnaJ_C| HM:PFM:REP 264->354|PF01556|6e-20|34.1|91/101|DnaJ_C| HM:PFM:REP 3->65|PF00226|1.3e-22|50.8|63/64|DnaJ| GO:PFM:NREP 3 GO:PFM GO:0031072|"GO:heat shock protein binding"|PF00226|IPR001623| GO:PFM GO:0006457|"GO:protein folding"|PF01556|IPR002939| GO:PFM GO:0051082|"GO:unfolded protein binding"|PF01556|IPR002939| RP:SCP:NREP 2 RP:SCP:REP 2->74|1bq0A|5e-17|43.8|73/77|a.2.3.1| RP:SCP:REP 232->367|2d7vA1|8e-12|8.3|132/155|d.227.1.1| HM:SCP:REP 1->76|1iurA_|9.8e-20|44.6|74/88|a.2.3.1|1/1|Chaperone J-domain| HM:SCP:REP 202->276|1nltA1|9.8e-09|25.3|75/75|b.4.1.1|1/2|HSP40/DnaJ peptide-binding domain| HM:SCP:REP 277->363|1c3gA2|1.6e-13|32.2|87/90|b.4.1.1|2/2|HSP40/DnaJ peptide-binding domain|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b*D1GBF6758H59IE55788A74T8ABDC77666645G65C44D264A2i46346IDEG3L65564655 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 242 STR:RPRED 65.2 SQ:SECSTR cccHHHHHTccTTccHHHHHHHHHHHHHHccTTTcTTcHHHHHHHHHHHHHHHHHTcHHHHHHHHHTcHHHHHHHHHcc###############################################################################################################################EEEEEEEEcHHHHHHTcEEEEEEEEEEEEEEEccTTccTTcEEEEcccccccccccccEEEEEEEEcccccEEEETTEEEEEEcccHHHHHHcEEEEEEcccccEEEEEcccccTTcEcTTccccccccTTccccEEEEEcccccccccTTHHHHHHHHcHHH## DISOP:02AL 68-87,103-123,151-167| PSIPRED cccHHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccEEEccccEEcccccccccccccccccccccccccccEEEEEEccccccccccEEEEccccccccEEEccccccEEEEHHHHccccccEEEEccEEEEEEEcccccccccEEEEccccccccccccccEEEEEEEEccccEEEEccEEEEEEEccHHHHccccEEEEEcccccEEEEEccccccccEEEEccEEccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHcc //