[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : dppD.1
DDBJ      :dppD         ABC transporter, nucleotide binding/ATPase protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  906/915 : Eukaryota  184/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:355 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   40->275 3dhwC PDBj 9e-26 34.2 %
:RPS:PDB   15->272 3dmdC PDBj 9e-49 10.6 %
:RPS:PDB   244->306 1dxrH PDBj 1e-08 7.4 %
:RPS:SCOP  20->275 1b0uA  c.37.1.12 * 1e-47 26.9 %
:HMM:SCOP  18->271 1g2912 c.37.1.12 * 7.7e-62 41.7 %
:RPS:PFM   69->199 PF00005 * ABC_tran 6e-10 40.3 %
:RPS:PFM   250->310 PF08352 * oligo_HPY 4e-10 44.3 %
:HMM:PFM   69->199 PF00005 * ABC_tran 8.9e-22 32.5 117/118  
:HMM:PFM   250->311 PF08352 * oligo_HPY 3.3e-17 37.7 61/64  
:HMM:PFM   42->77 PF01078 * Mg_chelatase 6.2e-05 41.7 36/207  
:BLT:SWISS 20->338 DPPD_BACSU 3e-66 44.7 %
:PROS 171->185|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87002.1 GT:GENE dppD.1 GT:PRODUCT ABC transporter, nucleotide binding/ATPase protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1192564..1193631 GB:FROM 1192564 GB:TO 1193631 GB:DIRECTION + GB:GENE dppD GB:PRODUCT ABC transporter, nucleotide binding/ATPase protein GB:PROTEIN_ID AAK87002.1 GB:DB_XREF GI:15156244 GB:GENE:GENE dppD LENGTH 355 SQ:AASEQ MNIEGQTLANTALSPERAPLLEIEDLHVSVPTPNGRKFVISGLTLSVNAGEVVALVGESGSGKSMTALSLMRLLPQGVEIDSGRISFAGRDILALSSSELDALRGADISMLFQQPQAMLDPTSRVRTQVAEPLWIHRKMSRSAALNRVVDLLSDVGIPDPSARAQCFAHELSGGMAQRVMIAAALSGNPQLLIADEPTTALDVTVQAQILRLLDDERRKRRLATLLITHDLSVVAAFADRIAVMYAGRIVEEGPTQAILKAPQHPYTKALISCSLLTTDSEGQLLTIPGSSAQAHDMSCGCRFHPRCALAKSAGMGGRCMATEPALNALPEGRKARCWAVGDDHADHDHSSHAVC GT:EXON 1|1-355:0| BL:SWS:NREP 1 BL:SWS:REP 20->338|DPPD_BACSU|3e-66|44.7|313/335| PROS 171->185|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 210->222|lrlldderrkrrl| SEG 342->353|ddhadhdhssha| BL:PDB:NREP 1 BL:PDB:REP 40->275|3dhwC|9e-26|34.2|225/343| RP:PDB:NREP 2 RP:PDB:REP 15->272|3dmdC|9e-49|10.6|227/318| RP:PDB:REP 244->306|1dxrH|1e-08|7.4|54/257| RP:PFM:NREP 2 RP:PFM:REP 69->199|PF00005|6e-10|40.3|119/123|ABC_tran| RP:PFM:REP 250->310|PF08352|4e-10|44.3|61/64|oligo_HPY| HM:PFM:NREP 3 HM:PFM:REP 69->199|PF00005|8.9e-22|32.5|117/118|ABC_tran| HM:PFM:REP 250->311|PF08352|3.3e-17|37.7|61/64|oligo_HPY| HM:PFM:REP 42->77|PF01078|6.2e-05|41.7|36/207|Mg_chelatase| GO:PFM:NREP 5 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0000166|"GO:nucleotide binding"|PF08352|IPR013563| GO:PFM GO:0005524|"GO:ATP binding"|PF08352|IPR013563| GO:PFM GO:0015833|"GO:peptide transport"|PF08352|IPR013563| RP:SCP:NREP 1 RP:SCP:REP 20->275|1b0uA|1e-47|26.9|245/258|c.37.1.12| HM:SCP:REP 18->271|1g2912|7.7e-62|41.7|240/240|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 35044 OP:NHOMOORG 1158 OP:PATTERN LLF8IEF7OPOOPLQEcEJIDGFMfILaXJVICAB9B7DCDB8NNMLZIL*rc7LPKLODIDFAO155 LNMD*UTQcceIQHSKLMM-MW99R*MMMMMJgZaaj***MoNzeyqUjfZLrllIOZ56pqbc*ao***XRRRRjSROJnTV87B9BGHEE3DBEE--88EADDFGIFK78888889AAAAAADMMDPLGIMILHZffolBA9gRYNUYRRTUXLMFCHCGCTRLWqjlMDFAE999F7EA8ZOSHFdb6MThyz*x*r**p***su**sooog***SYj*qcWfffffi**PZZZXZXVYZZZZYZURQPQhXTTilTFQJSjiGGkjRKKSXWTTTaacdgajdhdegeebdhgcehTRTSRTUVVUTRTkUUWUUXXXZL*gtvqtqwu*rZnWWlllKUVTtZXcSqPXMI**fYOQWcHTZUUSESTMCTSLLMDGEAFUQ***QPl****r*******zz**-ci*dV*d***R9**************CGE**********NMNNNNNNgRVDHYLz55445444333412223122121135465EA7FAB***v*******rtuuq****zvyycx***y**v6Gpphtcibe*o****QaZHQHLcLEEEFDEDLIKUVWQizHXQhaMXiURdDROOPNMTNSGHIHbmPmBCAF9BBCD8B797777777EI8BFEEfggChMOFMDmIMONKFKQMJJMKPQOOOK5-9BLMH1--111*p**Pznmppomqnrik-olmkokokmlpqoijliih*****WbZegccdedddecedecc*iheiigkO2************23HBAB9ABEFFDDBth*VVTOKPHMNLKOILTGIIII9MDJOfPfhfgo***jtuipV***B9968A889GXggljmkkmnrptrMKJGFGHBCB9A9A23CJIIDDDE66565666h8LB9C97-86B7DB87985DC878667MRYJHZpcbY9PH ----DD4-E94745AA5945BC8B7CCBB4556D996A9A7883445169ADIC9886953441-3341-3212-1----31113222-7H-55568734626B86-7OKD7A6HDG36515C9EI1E2PuB396E6563B45BD28642F31e7A78Q9Q*3OC64UACVHO9B7A85n45536DGFe8GF48ZOaS5 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-20, 276-288, 344-354| PSIPRED cccccccccccccccccccEEEEEccEEEEEccccEEEEEccccEEEccccEEEEEEEccccHHHHHHHHHHHcccccEEEccEEEEccEEHHcccHHHHHHHHHHHccEEEccHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHHHHHHccEEEEEccHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHccccccccccccccEEEccccEEEEEEccccccccccHHHccc //