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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : fdhA
DDBJ      :fdhA         glutathione-independent formaldehyde dehydrogenase
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  514/915 : Eukaryota  115/199 : Viruses  0/175   --->[See Alignment]
b.35.1c.2.1
:398 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->391 1kolA PDBj e-151 73.8 %
:RPS:PDB   4->394 2dphA PDBj 6e-34 46.7 %
:RPS:SCOP  7->184 1bxzA1  b.35.1.2 * 4e-29 25.5 %
:RPS:SCOP  164->354 1kolA2  c.2.1.1 * 2e-24 62.8 %
:HMM:SCOP  5->213 1kolA1 b.35.1.2 * 7.5e-63 47.0 %
:HMM:SCOP  164->354 1kolA2 c.2.1.1 * 5.7e-62 48.9 %
:RPS:PFM   39->145 PF08240 * ADH_N 6e-11 43.3 %
:HMM:PFM   37->146 PF08240 * ADH_N 1.8e-24 41.0 100/109  
:HMM:PFM   199->267 PF00107 * ADH_zinc_N 2.3e-10 36.8 68/130  
:BLT:SWISS 3->398 FADH_PSEAE e-152 73.2 %
:PROS 69->83|PS00059|ADH_ZINC
:PROS 236->272|PS00862|OX2_COVAL_FAD
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87351.2 GT:GENE fdhA GT:PRODUCT glutathione-independent formaldehyde dehydrogenase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1553545..1554741 GB:FROM 1553545 GB:TO 1554741 GB:DIRECTION + GB:GENE fdhA GB:PRODUCT glutathione-independent formaldehyde dehydrogenase GB:PROTEIN_ID AAK87351.2 GB:DB_XREF GI:159140104 GB:GENE:GENE fdhA LENGTH 398 SQ:AASEQ MDMSRNRGVVYLKPGQVEVRDIDDPKLEAPDGRRIEHGVILKVISTNICGSDQHMVRGRTTAMPGLVLGHEITGEVIEKGIDVEMLQVGDIVSVPFNVACGRCRCCKSQDTGVCLTVNPSRAGGAYGYVDMGGWIGGQARYVTIPYADFNLLKFPDRDKAMSKIRDLTMLSDILPTGFHGAVKAGVGVGSTVYVAGAGPVGLAAAASARILGAAVVMVGDFNKDRLAHAARVGFEPVDLSKGDRLGDMIAEIVGTNEVDSAIDAVGFEARGHSGGEQPAIVLNQMMEITRAAGSIGIPGLYVTEDPGAVDNAAKQGALSLRFGLGWAKAQSFHTGQTPVLKYNRQLMQAILHDRLPIADIVNAKIIALDDAVQGYESFDQGAATKFVLDPHGDLLKAA GT:EXON 1|1-398:0| BL:SWS:NREP 1 BL:SWS:REP 3->398|FADH_PSEAE|e-152|73.2|395/399| PROS 69->83|PS00059|ADH_ZINC|PDOC00058| PROS 236->272|PS00862|OX2_COVAL_FAD|PDOC00674| SEG 192->214|vyvagagpvglaaaasarilgaa| BL:PDB:NREP 1 BL:PDB:REP 6->391|1kolA|e-151|73.8|386/396| RP:PDB:NREP 1 RP:PDB:REP 4->394|2dphA|6e-34|46.7|390/398| RP:PFM:NREP 1 RP:PFM:REP 39->145|PF08240|6e-11|43.3|97/108|ADH_N| HM:PFM:NREP 2 HM:PFM:REP 37->146|PF08240|1.8e-24|41.0|100/109|ADH_N| HM:PFM:REP 199->267|PF00107|2.3e-10|36.8|68/130|ADH_zinc_N| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| RP:SCP:NREP 2 RP:SCP:REP 7->184|1bxzA1|4e-29|25.5|157/178|b.35.1.2| RP:SCP:REP 164->354|1kolA2|2e-24|62.8|191/195|c.2.1.1| HM:SCP:REP 5->213|1kolA1|7.5e-63|47.0|202/0|b.35.1.2|1/2|GroES-like| HM:SCP:REP 164->354|1kolA2|5.7e-62|48.9|188/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1386 OP:NHOMOORG 656 OP:PATTERN ------1133333311-211-1--51111141------------------121------1---1---- 12412--1--1----2211-16--2511111165564462-3146133-1-164623211132232575431111121----4-----1111-1-----1-1-1-5132---------------------------122-----12--14----------------1335-------------322114114-411111111-11111143334311-21--21-2222211-1111-11-121111211232--2--2-4--13322--1-1112111212-11111122222222222111111111111111111111121--12221222221123--1-----1----1--11---111--1112---2-3-112-----111232--11-11----------2-63336143221-333-3322533612-1-112211211111111111-221--1--------------------------------23------13443446333266445555-31561212--11313112-1---21---2-11-111--1---12--1-----1---1----323---2--1132442----------------------------11--2-2-11--111111-1111-1-1111---11---------2--1-11112112112-1221-1-1-211-11111111-12221222-2222222222--121-1112--111111111111----111111------33---------------11112--11-2-42441422323233333111111111----------11---2143333332-------211---------------------1-----------1-------11--------1- -------------23653557C6B4C83322122114312222221742486DG45433222-13-2--2--213------2221111-49452418232112211--213-----------1-1--6-3A3-526211-2--1--1-------221-2-----------2-----23-----122---4-3111-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 397 STR:RPRED 99.7 SQ:SECSTR TccccEEEEEEEETTEEEEEEEccccccEETTEEcTTcEEEEEEEEEccHHHHHHHTTcccccTTccccccEEEEEEEEcTTcccccTTcEEEccccccccccHHHHTTcGGGcccTTTccccccccTTTTcccccccccEEEEccHHHHcEEcccHHHHHHTHHHHTTTTTHHHHHHHHHHHTTccTTcEEEEEcccHHHHHHHHHHHHHTccEEEEEEccHHHHHHHHTTTcEEEETTccccHHHHHHHHHccccEEEEEEcccTTccccGGGTTccHHHHHHHHHEEEEEEEEccccccccccccccHHHHTTcccccHHHHHHTTcEEEcccccGGGTHHHHHHHHHTTccHHHHHHcEEEEccTTHHHHHHHHHTTcccEEEEcTTcccccc# DISOP:02AL 1-4,394-399| PSIPRED cccccEEEEEEEcccEEEEEEEcccccccccccccccEEEEEEEEEEEEccEEEEEEccccccccEEcccccEEEEEEEcccccccccccEEEEcccccccccHHHcccccccccccccccccccccccccccccccEEEEEEEccHHEEEEEccccccccccHHccHHHccHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEccccccHHHHHHHHHccccccEEEEccccccccccccccHHHHHHHHHHHHccccEEEEEccccccccccccHHHHccEEEEEEEEEEEEEEEEEccccccHHHHHHHHHHHHcccccHHHEEEEEEEcHHHHHHHHHHHHccccEEEEEEcccHHHccc //