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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : fdx
DDBJ      :fdx          ferrodoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  138/915 : Eukaryota  64/199 : Viruses  0/175   --->[See Alignment]
d.15.4
:106 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->105 1e9mA PDBj 7e-24 48.5 %
:RPS:PDB   3->105 1cjeD PDBj 4e-12 22.3 %
:RPS:SCOP  3->102 1ayfA  d.15.4.1 * 5e-11 23.0 %
:HMM:SCOP  2->106 1xlqA1 d.15.4.1 * 8e-32 41.9 %
:HMM:PFM   10->90 PF00111 * Fer2 7.9e-18 33.3 72/77  
:BLT:SWISS 1->105 FER2_CAUCR 4e-27 63.8 %
:PROS 40->50|PS00814|ADX
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87142.2 GT:GENE fdx GT:PRODUCT ferrodoxin GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1345307..1345627 GB:FROM 1345307 GB:TO 1345627 GB:DIRECTION + GB:GENE fdx GB:PRODUCT ferrodoxin GB:PROTEIN_ID AAK87142.2 GB:DB_XREF GI:159140012 GB:GENE:GENE fdx LENGTH 106 SQ:AASEQ MTKLTIVAFDGTPHELDVSNGSTVMENAVRNSVPGIDAECGGACACATCHVYVDDAWAERVGGPEPMEEDMLDFAFEVRPTSRLSCQIKMNDELDGLVVHVPERQG GT:EXON 1|1-106:0| BL:SWS:NREP 1 BL:SWS:REP 1->105|FER2_CAUCR|4e-27|63.8|105/106| PROS 40->50|PS00814|ADX|PDOC00642| SEG 38->49|aecggacacatc| BL:PDB:NREP 1 BL:PDB:REP 3->105|1e9mA|7e-24|48.5|103/106| RP:PDB:NREP 1 RP:PDB:REP 3->105|1cjeD|4e-12|22.3|103/107| HM:PFM:NREP 1 HM:PFM:REP 10->90|PF00111|7.9e-18|33.3|72/77|Fer2| RP:SCP:NREP 1 RP:SCP:REP 3->102|1ayfA|5e-11|23.0|100/103|d.15.4.1| HM:SCP:REP 2->106|1xlqA1|8e-32|41.9|105/0|d.15.4.1|1/1|2Fe-2S ferredoxin-like| OP:NHOMO 236 OP:NHOMOORG 202 OP:PATTERN -------------------------------------------------------------------- --------------1------1--1--------1112214----------------------1--1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----212231122112111111111111-11111211114-1111112111111121111211111121111111111112111---111111111111111111-11-111111272--111-----1---------1--------2--------------1-21----------------------1----------------------------------------------------------------1--1--1---------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------1-------------------------------------------------------- -----1--11--11-111--11--11111111111--2111-111111111111---1111111-1111-11---1111111111-------1-----------------2----------------------------------------------------1-------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 105 STR:RPRED 99.1 SQ:SECSTR cEEEEEEcTTccEEEEEEcTTccHHHHHHHTTccTTccTTcccccccTTEEEccHHHHHHcccccHHHHHHHTTcTTccTTEEETTTccccGGGTTcEEEccccc# DISOP:02AL 104-107| PSIPRED ccEEEEEcccccEEEEEEcccccHHHHHHHccccccccccccccEEcEEEEEEcccHHcccccccHHHHHHHHHHcccccccEEEEEEEEccccccEEEEcccccc //