[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : fla
DDBJ      :fla          flagellin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  84/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
e.32.1
:313 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   104->152 2c5jA PDBj 1e-04 8.5 %
:HMM:SCOP  1->312 1ucuA_ e.32.1.1 * 3.4e-61 28.7 %
:RPS:PFM   6->137 PF00669 * Flagellin_N 4e-07 31.8 %
:HMM:PFM   4->137 PF00669 * Flagellin_N 8.3e-33 33.6 134/139  
:HMM:PFM   227->310 PF00700 * Flagellin_C 1.2e-18 26.2 84/86  
:BLT:SWISS 1->313 FLAC_RHIME 4e-67 51.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86355.1 GT:GENE fla GT:PRODUCT flagellin GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(531936..532877) GB:FROM 531936 GB:TO 532877 GB:DIRECTION - GB:GENE fla GB:PRODUCT flagellin GB:PROTEIN_ID AAK86355.1 GB:DB_XREF GI:15155479 GB:GENE:GENE fla LENGTH 313 SQ:AASEQ MTSILTNTAAMSALQTLRAISGQLEDTQSRVSSGLRVKSASDNAAYWSIATTMRSDNMALSAVQDALGLGAAKVDVAYSAMESTVEVVKEIKSKIVAATEEGVDKTKIQEEIDQLKKQLESIAQGASFSGENWLLGTGAKTVVSGFVRDGGGTVSVTKTDYTLIDTTAGTTTANVLFGLTGSPATLDTTKGIIGQPGTASGISVWDIDLKLFNSATPPTYTIGNLLTDVETAFQSISSASAALGSIKMRIGLQEDFVSKLTDSIDKGIGRLVDADMNEESTKLKALQTQQQLGIQSLSIANTSSENILSLFRQ GT:EXON 1|1-313:0| BL:SWS:NREP 1 BL:SWS:REP 1->313|FLAC_RHIME|4e-67|51.7|302/321| SEG 82->96|estvevvkeikskiv| SEG 159->173|tdytlidttagttta| SEG 237->242|ssasaa| SEG 281->292|tklkalqtqqql| RP:PDB:NREP 1 RP:PDB:REP 104->152|2c5jA|1e-04|8.5|47/82| RP:PFM:NREP 1 RP:PFM:REP 6->137|PF00669|4e-07|31.8|132/137|Flagellin_N| HM:PFM:NREP 2 HM:PFM:REP 4->137|PF00669|8.3e-33|33.6|134/139|Flagellin_N| HM:PFM:REP 227->310|PF00700|1.2e-18|26.2|84/86|Flagellin_C| GO:PFM:NREP 3 GO:PFM GO:0001539|"GO:ciliary or flagellar motility"|PF00669|IPR001492| GO:PFM GO:0005198|"GO:structural molecule activity"|PF00669|IPR001492| GO:PFM GO:0009420|"GO:bacterial-type flagellum filament"|PF00669|IPR001492| HM:SCP:REP 1->312|1ucuA_|3.4e-61|28.7|307/0|e.32.1.1|1/1|Phase 1 flagellin| OP:NHOMO 183 OP:NHOMOORG 84 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------65631----112-----11--111111111111-21421-1122-15447674777443-6151111-11161-----------2--21----------------------------------1---------------------------------------1----------------1--------1---------1----------------------1-----------221------------------1--1-1--------------------------------------------------------------------------------------------------------------------------------11-1--1-2------------------------------------------------------------------11---------------------------------------------------------------11--111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 47 STR:RPRED 15.0 SQ:SECSTR #######################################################################################################HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH##HHHHHHHHHHHHH################################################################################################################################################################# DISOP:02AL 17-32, 55-61, 99-100| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccEEEEEEEEccccEEEEEccHHHHHHHHccccccHHHHccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //