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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : flaD
DDBJ      :flaD         flagellin protein FlaD
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  173/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
e.32.1
:430 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->172,347->430 1ucuA PDBj 3e-05 23.3 %
:RPS:PDB   53->219 2d4xA PDBj 1e-06 12.0 %
:HMM:SCOP  1->430 1ucuA_ e.32.1.1 * 2.2e-60 26.5 %
:RPS:PFM   6->130 PF00669 * Flagellin_N 4e-09 35.2 %
:RPS:PFM   347->428 PF00700 * Flagellin_C 5e-07 35.4 %
:HMM:PFM   4->136 PF00669 * Flagellin_N 1.6e-31 33.8 133/139  
:HMM:PFM   345->428 PF00700 * Flagellin_C 1e-19 29.8 84/86  
:BLT:SWISS 1->430 FLAB1_RHIME 1e-94 58.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86378.2 GT:GENE flaD GT:PRODUCT flagellin protein FlaD GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 551215..552507 GB:FROM 551215 GB:TO 552507 GB:DIRECTION + GB:GENE flaD GB:PRODUCT flagellin protein FlaD GB:PROTEIN_ID AAK86378.2 GB:DB_XREF GI:159139683 GB:GENE:GENE flaD LENGTH 430 SQ:AASEQ MTSILTNAAAMAALQTLRMIDKNLETTQARVSSGFRVETAADNAAYWSIATTMRSDNSALSAVQDALGLGAAKVDTAYDALESTIEVVKQIKAKLVAAYGVGADRGKIQDEIKQLQEQLKSISESASFSGENWLQASISNSGTPPVAESITKKVVASFTRTGSGNVGVTTVDYTLDSSTVLFDLSGGKLGILDKNAVFVSKTETEVMQTSTTAGKTSQAGYVVEKLSDAQIGALNATTTDTNTDPNLYSNGTDNYLRLAENVWVKATATNPSSGGTTVSPAYRDTGSTDWFYDVSAGTASANRSLGFSVSTLDLGNLDVVAAAMGGFAGGGTTYTGADAIDMMMSFVDKQLEAMTSTASSLGSLQSRISMQENFVSSLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLGIQALSIANANAENILQLFK GT:EXON 1|1-430:0| BL:SWS:NREP 1 BL:SWS:REP 1->430|FLAB1_RHIME|1e-94|58.4|394/394| SEG 233->247|alnatttdtntdpnl| SEG 321->339|aaamggfagggttytgada| BL:PDB:NREP 1 BL:PDB:REP 24->172,347->430|1ucuA|3e-05|23.3|230/494| RP:PDB:NREP 1 RP:PDB:REP 53->219|2d4xA|1e-06|12.0|167/214| RP:PFM:NREP 2 RP:PFM:REP 6->130|PF00669|4e-09|35.2|125/137|Flagellin_N| RP:PFM:REP 347->428|PF00700|5e-07|35.4|82/86|Flagellin_C| HM:PFM:NREP 2 HM:PFM:REP 4->136|PF00669|1.6e-31|33.8|133/139|Flagellin_N| HM:PFM:REP 345->428|PF00700|1e-19|29.8|84/86|Flagellin_C| GO:PFM:NREP 6 GO:PFM GO:0001539|"GO:ciliary or flagellar motility"|PF00669|IPR001492| GO:PFM GO:0005198|"GO:structural molecule activity"|PF00669|IPR001492| GO:PFM GO:0009420|"GO:bacterial-type flagellum filament"|PF00669|IPR001492| GO:PFM GO:0001539|"GO:ciliary or flagellar motility"|PF00700|IPR001029| GO:PFM GO:0005198|"GO:structural molecule activity"|PF00700|IPR001029| GO:PFM GO:0009288|"GO:bacterial-type flagellum"|PF00700|IPR001029| HM:SCP:REP 1->430|1ucuA_|2.2e-60|26.5|392/0|e.32.1.1|1/1|Phase 1 flagellin| OP:NHOMO 343 OP:NHOMOORG 174 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------11-1-11-112--1------1-------------------------------------------------------------------------------------------------------------2------------------2----------1-1111-------65631----112--1-112--111111111111-4344312422115447674777443-6151112122161---------112-121--------------------------------1-1-----1----1------------1-1-------------2------1-1--1-------------1---1---1-2-------------------21-2-----112-222212232222222-11----12-1-12111-------1--22---21------1----------------------------1--1-------1-------------------------------------------------------------11-1--2-2--------------------------211-1----2-----------------144412222232-33-1--------------4-------------------------------------------1--21-1111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 280 STR:RPRED 65.1 SQ:SECSTR #######################HHHHHHHHHTcccTTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHHHHTcccTTcccTTcTTcTTcccccTTTcccccccccEEEEcccccEEEEcccHHHHHccccTTccccTTcccccccHHHHHHHHHHHHTcccTTcHHH###############################################################################################################################HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccc DISOP:02AL 17-33,55-64,97-106| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccEEEEEcccccEEEEEEEEEccccEEEEEEEEEEEcccEEEEEEcccccccccccccccccHHccccEEccccccccccEEEEEEccccEEEEEEEEcccccccEEEEEcccccccccccccccccEEccccccccEEEEEEcccccccEEEEEEEEEEEEccccEEEcccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //