[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : flhB
DDBJ      :flhB         flagellar biosynthetic protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  502/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
d.367.1
:360 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   230->346 2w0rA PDBj 2e-17 35.0 %
:RPS:PDB   258->350 3c03A PDBj 3e-34 36.6 %
:RPS:SCOP  258->350 3bzl.1  d.367.1.1 * 6e-35 37.6 %
:RPS:PFM   6->346 PF01312 * Bac_export_2 1e-56 37.3 %
:HMM:PFM   7->350 PF01312 * Bac_export_2 7.9e-129 41.6 341/343  
:BLT:SWISS 1->359 FLHB_RHIME e-116 57.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86376.1 GT:GENE flhB GT:PRODUCT flagellar biosynthetic protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 549382..550464 GB:FROM 549382 GB:TO 550464 GB:DIRECTION + GB:GENE flhB GB:PRODUCT flagellar biosynthetic protein GB:PROTEIN_ID AAK86376.1 GB:DB_XREF GI:15155504 GB:GENE:GENE flhB LENGTH 360 SQ:AASEQ MADDQDKDSKTEDPTEKKLRDAAEKGNLPFSREVPIFASSLAFYCYLVFFLPEGAGRLGVTLKDLFGQPEQWNLSTRPDALALLYFLGTSVAYLLMPAMIMFIVFGLASSFLQNLPSPVLERVRPQWSRISPAKGFTRIYSKQGFVEFAKSVFKIMIVSIIMFFALRGDFYSLIDLMFSDPQVIFVRVVEIVKKMMVVILLSTALLAAVDVLWTRHHWFSQLKMTKHEVKEEYKQSQGDPVVKSRQRSIARDRARRRMINNVPRATLVIANPTHFAVALRYVREEGDAPVVVAKGQDLIALKIRQIAEENNIPVFEDPPLARSMFAQVSVDSVIPPVFYKAVAELVHRVYARTSSKIRVQ GT:EXON 1|1-360:0| BL:SWS:NREP 1 BL:SWS:REP 1->359|FLHB_RHIME|e-116|57.1|359/360| TM:NTM 4 TM:REGION 31->53| TM:REGION 83->105| TM:REGION 151->173| TM:REGION 188->210| SEG 186->199|vrvveivkkmmvvi| SEG 244->257|srqrsiardrarrr| BL:PDB:NREP 1 BL:PDB:REP 230->346|2w0rA|2e-17|35.0|117/122| RP:PDB:NREP 1 RP:PDB:REP 258->350|3c03A|3e-34|36.6|93/97| RP:PFM:NREP 1 RP:PFM:REP 6->346|PF01312|1e-56|37.3|335/342|Bac_export_2| HM:PFM:NREP 1 HM:PFM:REP 7->350|PF01312|7.9e-129|41.6|341/343|Bac_export_2| GO:PFM:NREP 2 GO:PFM GO:0009306|"GO:protein secretion"|PF01312|IPR006135| GO:PFM GO:0016020|"GO:membrane"|PF01312|IPR006135| RP:SCP:NREP 1 RP:SCP:REP 258->350|3bzl.1|6e-35|37.6|93/99|d.367.1.1| OP:NHOMO 701 OP:NHOMOORG 506 OP:PATTERN -------------------------------------------------------------------- 111-------------------------------------1---1---1-------------1-1------------------11211--------------------1-111111111111111--------------------1---------------------------------------------111111111-11111111111111111111111111111121------------------------------------------------------------------------------------------11111111111111111111---111--11121111112111111111--11111111----114111111211211111111111-2222212211111111112111111-1111112222111--------1111-121--------------------------------111122212222422333122114445141212111--112112111--121111111141-------111111112-1211111222211111111111-13-2-2221-111111111111-111111---13-111111111312131211121122221---111111111121122141331111121-3212221111313111111---2232122122222222222221111211231344444334343--2------1111--411-------------------------1122121112311111222---------1111211111341111122222223------111111111111111111--------------------------1-11111111-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1-1----------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 121 STR:RPRED 33.6 SQ:SECSTR #####################################################################################################################################################################################################################################cccccTTcccHHHHHHHHHHHHHHccccHHHHHHHccEEEEETTTEEEEEEccTTTccccEEEEEEETHHHHHHHHHHHHTTccEEEcHHHHHHHHHHccTTccccGGGHHHHHHHHHHHH########## DISOP:02AL 1-28, 238-239, 242-266, 355-360| PSIPRED cccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHcccccEEEEcccEEEEEEEEEcccccccEEEEEcHHHHHHHHHHHHHHccccEEEcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccc //