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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : fliF
DDBJ      :fliF         flagellar M-ring protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  449/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:566 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   338->440 3a64A PDBj 7e-13 9.7 %
:RPS:PFM   38->223 PF01514 * YscJ_FliF 3e-31 41.6 %
:RPS:PFM   255->415 PF08345 * YscJ_FliF_C 2e-08 31.0 %
:HMM:PFM   35->226 PF01514 * YscJ_FliF 1.5e-58 36.0 189/207  
:HMM:PFM   255->420 PF08345 * YscJ_FliF_C 1.9e-36 30.6 160/160  
:BLT:SWISS 7->566 FLIF_RHIME e-175 64.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86337.1 GT:GENE fliF GT:PRODUCT flagellar M-ring protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 512099..513799 GB:FROM 512099 GB:TO 513799 GB:DIRECTION + GB:GENE fliF GB:PRODUCT flagellar M-ring protein GB:PROTEIN_ID AAK86337.1 GB:DB_XREF GI:15155457 GB:GENE:GENE fliF LENGTH 566 SQ:AASEQ MTVRNRMNLLNQIPQVLKNVAALGQTRLLMLGGVGVLSMAIILAAALYVNRPAYETLYVGLEKSDLNKISIALAESGLDFQVGTDGSSLQVPVGLTSKARLLLAERGLPDSANAGYELFDNVGSLGLTSFMQEVTRVRALEGEIGRSIQQIDGVSAARVHIVLPDVGNFRRGEQKPTASVMIRASASAGRKASASIRHLVASAVPGLEVDDVTLLDSTGQLLASGDDVTNAAMNRSLTLAQNVQQEITTNIDKALAPFLGIDNFRSSVTAQINTDSRQVQETVYDPESRVERSVRTVKEDQKSQETQPDTAATVEQNVPQAAPQGGGGGPQSSDQSAKKEEQTNYEINSKTVATVKNGYTLEKISVAVVVNKGRIAKMVGEPADQAKIDAYLAEMQKIVTSAAGISSDRGDIVTLTAMDFLETQLLDEAASGPGVMEVLSRNSAGIINSLAFVAVAFLVVWLGVRPLVRTVTANGSAAAQLSQESAGLELPDFSPGMEAGAGGLMEGFGADFGFDSTDDLLAGGDGEGTFNRRVREGPERRLSRMVEISEERAAKILRKWAVEKAA GT:EXON 1|1-566:0| BL:SWS:NREP 1 BL:SWS:REP 7->566|FLIF_RHIME|e-175|64.5|557/557| TM:NTM 2 TM:REGION 31->53| TM:REGION 445->467| SEG 28->37|llmlggvgvl| SEG 183->197|rasasagrkasasir| SEG 319->337|pqaapqgggggpqssdqsa| SEG 450->460|lafvavaflvv| SEG 496->510|gmeagagglmegfga| RP:PDB:NREP 1 RP:PDB:REP 338->440|3a64A|7e-13|9.7|103/371| RP:PFM:NREP 2 RP:PFM:REP 38->223|PF01514|3e-31|41.6|185/206|YscJ_FliF| RP:PFM:REP 255->415|PF08345|2e-08|31.0|155/160|YscJ_FliF_C| HM:PFM:NREP 2 HM:PFM:REP 35->226|PF01514|1.5e-58|36.0|189/207|YscJ_FliF| HM:PFM:REP 255->420|PF08345|1.9e-36|30.6|160/160|YscJ_FliF_C| OP:NHOMO 511 OP:NHOMOORG 451 OP:PATTERN -------------------------------------------------------------------- 1111------------------------------------1---1---1--1-1--------1-1------------------11111--------------------1------------------------------------1---------------------------------------------111--1-1-1111-1--111111111-111111111111111------------------------------------------------------------------------------------------12111111-111111-1111----1---1--11111111111111111--11-11111----112111111211211121-111-1-2222212211111111112111111-1111112222111--------1111-121--------------------------------11111-111111211111111112223131111111--111111111--121111211121-------111-11111-11111111111111111111111---1-1111-1111111111111111111---12-111111111211131211121122221---111111111121111111111111111-1211211111112-11--1---11111111111111111111111-----111122222222222---------1111--211-------------------------1111111111211111111---------1-11211111221111111111112------11-------11-1-------------------------------1-11111111-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 103 STR:RPRED 18.2 SQ:SECSTR #################################################################################################################################################################################################################################################################################################################################################THHHHHcTTcHHHHHHHHHHHHHHHHcccTTEEEEcccHHHHccHHHHHHHHHHHHHHHHHHHTTcTTccccEEEEcTTcccccccccccGGGTTcccccHHH############################################################################################################################## DISOP:02AL 4-7, 165-179, 223-242, 279-344, 477-544, 564-566| PSIPRED ccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccEEccccccHHHHHHHHHHHHHccccEEEcccccEEEEcHHHHHHHHHHHHHccccccccccHHHHcccccEEccHHHHHHHHHHHHHHHHHHHHHHccHHHcEEEEEEEcccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHccccccccEEEEccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccccEEEEEEEEcccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEcccEEEEEEEcccEEEEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHccccccccccHHHccccccccccHHccccccHHHHHHccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHccc //