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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : fliM
DDBJ      :fliM         flagellar motor switch protein
Swiss-Prot:FLIM_AGRT5   RecName: Full=Flagellar motor switch protein fliM;

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.139.1
:319 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  234->313 1o6aA  b.139.1.1 * 2e-10 16.7 %
:HMM:SCOP  230->318 1o6aA_ b.139.1.1 * 1e-11 21.8 %
:HMM:PFM   234->307 PF01052 * SpoA 5e-16 31.9 72/77  
:HMM:PFM   95->203 PF02154 * FliM 0.00011 19.0 105/192  
:BLT:SWISS 12->319 FLIM_AGRT5 e-167 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86373.2 GT:GENE fliM GT:PRODUCT flagellar motor switch protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 546623..547582 GB:FROM 546623 GB:TO 547582 GB:DIRECTION + GB:GENE fliM GB:PRODUCT flagellar motor switch protein GB:PROTEIN_ID AAK86373.2 GB:DB_XREF GI:159139681 GB:GENE:GENE fliM LENGTH 319 SQ:AASEQ MAKAAAQKASAPTIDTALLAKLTGGLTDRKTIAKIGADIGHLYSEFLPDTFHSETGIAIDVEYIGSESGLMTDLIANVGQNVAVADCSLRNWCPNFMMAVGNGFVIALMERMLGASPDSIGDPDERNLSHIELDLAAMVLGRIAGVLRSGVNAPGGFEATIDPPFNANGKSAFDEMIAGLYGVTIRMKIDIGKVSSEFSLIVPQRPLLKTSIVAPKASAQALKKQEEWMDMISQQVKRSQVTLEARIKLETLTLRTISRLVAGDVIPFQDLKQDDIGVEVSANGSKLYNCEFGKSGDRYMVRVKNNVSTDDEILRHLMG GT:EXON 1|1-319:0| SW:ID FLIM_AGRT5 SW:DE RecName: Full=Flagellar motor switch protein fliM; SW:GN Name=fliM; OrderedLocusNames=Atu0561; ORFNames=AGR_C_987; SW:KW Bacterial flagellum; Cell inner membrane; Cell membrane; Chemotaxis;Complete proteome; Flagellar rotation; Membrane. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 12->319|FLIM_AGRT5|e-167|100.0|308/321| GO:SWS:NREP 6 GO:SWS GO:0009288|"GO:bacterial-type flagellum"|Bacterial flagellum| GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0006935|"GO:chemotaxis"|Chemotaxis| GO:SWS GO:0001539|"GO:ciliary or flagellar motility"|Flagellar rotation| GO:SWS GO:0016020|"GO:membrane"|Membrane| SEG 2->11|akaaaqkasa| SEG 16->27|tallakltgglt| HM:PFM:NREP 2 HM:PFM:REP 234->307|PF01052|5e-16|31.9|72/77|SpoA| HM:PFM:REP 95->203|PF02154|0.00011|19.0|105/192|FliM| RP:SCP:NREP 1 RP:SCP:REP 234->313|1o6aA|2e-10|16.7|78/87|b.139.1.1| HM:SCP:REP 230->318|1o6aA_|1e-11|21.8|87/87|b.139.1.1|1/1|Surface presentation of antigens (SPOA)| OP:NHOMO 17 OP:NHOMOORG 17 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----11-1111111111111----------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-12,213-232| PSIPRED ccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHcccEEEEEEEEEEEEEHHHHHccccccEEEEEEEccccccEEEEEEcHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccccccEEccccEEEEEEEEEEEcccEEEEEEEEEEHHHHcHHHHHHHcccccccccHHHHHHHHHHHHHcccEEEEEEEEEEEEHHHHHccccccEEEEccccccccEEEEEEccEEEEEEEEEEEccEEEEEEEcccccHHHHHHHHcc //