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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : fstY
DDBJ      :fstY         cell division particle
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  900/915 : Eukaryota  186/199 : Viruses  0/175   --->[See Alignment]
a.24.13b.65.1c.37.1
:478 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   179->475 2qy9A PDBj 4e-54 42.6 %
:RPS:PDB   219->475 2cnwD PDBj 1e-30 33.1 %
:RPS:SCOP  185->266 1ftsA1  a.24.13.1 * 2e-11 22.0 %
:RPS:SCOP  318->435 1f3uA  b.65.1.1 * 8e-31 17.2 %
:HMM:SCOP  176->255 1vmaA1 a.24.13.1 * 3.9e-21 38.8 %
:HMM:SCOP  275->479 1ls1A2 c.37.1.10 * 1.3e-50 37.7 %
:RPS:PFM   304->475 PF00448 * SRP54 2e-35 51.2 %
:HMM:PFM   276->475 PF00448 * SRP54 4e-74 53.1 194/196  
:HMM:PFM   182->247 PF02881 * SRP54_N 4.6e-13 33.3 63/75  
:BLT:SWISS 178->475 FTSY_HAEIN 3e-56 41.9 %
:PROS 450->463|PS00300|SRP54
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88413.1 GT:GENE fstY GT:PRODUCT cell division particle GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2676873..2678309) GB:FROM 2676873 GB:TO 2678309 GB:DIRECTION - GB:GENE fstY GB:PRODUCT cell division particle GB:PROTEIN_ID AAK88413.1 GB:DB_XREF GI:15157906 GB:GENE:GENE fstY LENGTH 478 SQ:AASEQ MALGFIKKVFSFGKDKAETEERPQEDAALERGNENASFEAALSDAEAHDAVDKDPVSELEMETAGGPAADEAVDVAPAEDDEEEDAPLLPGAELSGDMGLVPLSLLQAEAAAEEQGEPLPEPLDAGLDADAMDALLNEAEAASAVESPAIPPVLPKGFSSAREREEPVPVAPQVKLTWFQRLRAGLARTSSQLTTQISALFTKRKLDEDTLDELEDLLIQSDLGVETAMRITGALSSERYGKDVSGEDVARIMAGEITKVLKPVAKPLELDLSHKPHVILVVGVNGTGKTTTIGKLAAKLSGSGLKVMLAAGDTFRAAAIEQLKIWADRTGSEFIGTKLGADAAGLAYDAYEQARAQKSDVLIIDTAGRLQNKTELMAELEKIVRVLGKLDPDAPHTVLQTLDATTGQNAMNQVEIFRNVAGVSGLIMTKLDGTARGGILVAIAAKHKLPVYFIGVGEGVEDLEPFEAEDFAKAIAGV GT:EXON 1|1-478:0| BL:SWS:NREP 1 BL:SWS:REP 178->475|FTSY_HAEIN|3e-56|41.9|298/414| PROS 450->463|PS00300|SRP54|PDOC00272| SEG 64->86|aggpaadeavdvapaeddeeeda| SEG 102->153|plsllqaeaaaeeqgeplpepldagldadamdallneaeaasavespaippv| SEG 206->218|ldedtldeledll| SEG 280->300|lvvgvngtgktttigklaakl| SEG 339->351|lgadaaglayday| BL:PDB:NREP 1 BL:PDB:REP 179->475|2qy9A|4e-54|42.6|296/300| RP:PDB:NREP 1 RP:PDB:REP 219->475|2cnwD|1e-30|33.1|257/281| RP:PFM:NREP 1 RP:PFM:REP 304->475|PF00448|2e-35|51.2|166/196|SRP54| HM:PFM:NREP 2 HM:PFM:REP 276->475|PF00448|4e-74|53.1|194/196|SRP54| HM:PFM:REP 182->247|PF02881|4.6e-13|33.3|63/75|SRP54_N| GO:PFM:NREP 2 GO:PFM GO:0005525|"GO:GTP binding"|PF00448|IPR000897| GO:PFM GO:0006614|"GO:SRP-dependent cotranslational protein targeting to membrane"|PF00448|IPR000897| RP:SCP:NREP 2 RP:SCP:REP 185->266|1ftsA1|2e-11|22.0|82/84|a.24.13.1| RP:SCP:REP 318->435|1f3uA|8e-31|17.2|116/118|b.65.1.1| HM:SCP:REP 176->255|1vmaA1|3.9e-21|38.8|80/0|a.24.13.1|1/1|Domain of the SRP/SRP receptor G-proteins| HM:SCP:REP 275->479|1ls1A2|1.3e-50|37.7|199/0|c.37.1.10|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2323 OP:NHOMOORG 1153 OP:PATTERN 22222222111222222222222222222222222222222222222222222222222222222-22 2222222222222222222-22222222222222222222222222122222222222222222222222222222222222222322222222222--222222222222222222222222222222222222222222---2222222222222222222222222222222222222222222222-22222222222222222222222222222222222222222222222222222222122222221222222222222222222222122222222222222222222222222222222222222222222232322222222222222222222222223222222222322322223222222222222222222222222222222222222222-22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222232222222222222222222222222222222222222222222222222222222222-2222222222222222222222222222-222222222222222222222222222222222222222222222222212222222222222222222222222222222222222222222222222221222222222222222222222222222222222222222222222222222222222222222222211----2222222222222222-22222222222222122222222222222222 2222221-6222112112122222222221111221111111111122222222112221-1211121111-1111111122212121-11111211111111221211511311121111-1-22-1-151-12311112-111111111-121122-12111211123511214334s44344458B-644432224 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 62.8 SQ:SECSTR ##################################################################################################################################################################################cHHHHHHcHHHHHHHHHHHHTTTTcHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHcccHHHHHHHHHHHHTcccHHHHHHHHTTccccccccccccEEEEEccTTccHHHHHHHHHHHHHTTTccEEEEccccccTTHHHHHHHHHHHHTccEEcccTTccHHHHHHHHHHHHHHTTccEEEEccccccTTcHHHHHHHHHHHHHHHHHcTTcccEEEEEEETTccTHHHHHHHHHHHHHcccEEEEEcTTcccccTTHHHHHHHHcccEEEEEccccTTcEEEccHHHHHHHHTTc DISOP:02AL 1-2, 8-184| PSIPRED ccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHcc //