[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : fumC
DDBJ      :fumC         fumarate hydratase
Swiss-Prot:FUMC_AGRT5   RecName: Full=Fumarate hydratase class II;         Short=Fumarase C;         EC=4.2.1.2;

Homologs  Archaea  34/68 : Bacteria  733/915 : Eukaryota  179/199 : Viruses  0/175   --->[See Alignment]
a.127.1
:463 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->463 3e04D PDBj e-157 61.3 %
:RPS:PDB   3->463 3e04B PDBj e-131 62.8 %
:RPS:SCOP  5->459 1fuoA  a.127.1.1 * e-143 53.4 %
:HMM:SCOP  4->462 1j3uA_ a.127.1.1 * 1.7e-163 41.5 %
:RPS:PFM   18->331 PF00206 * Lyase_1 2e-53 44.6 %
:RPS:PFM   408->459 PF10415 * FumaraseC_C 9e-13 61.5 %
:HMM:PFM   12->342 PF00206 * Lyase_1 4.9e-113 51.9 310/312  
:HMM:PFM   408->462 PF10415 * FumaraseC_C 3.4e-24 56.4 55/55  
:BLT:SWISS 1->463 FUMC_AGRT5 0.0 100.0 %
:PROS 317->326|PS00163|FUMARATE_LYASES
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87395.2 GT:GENE fumC GT:PRODUCT fumarate hydratase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1599895..1601286 GB:FROM 1599895 GB:TO 1601286 GB:DIRECTION + GB:GENE fumC GB:PRODUCT fumarate hydratase GB:PROTEIN_ID AAK87395.2 GB:DB_XREF GI:159140124 GB:GENE:GENE fumC LENGTH 463 SQ:AASEQ MTATRTETDTFGPIEVQADRYWGAQAQRSLGNFKIGWEKQPASVVRALGIVKQAAARANMALAGLDPKVGDAIIAAAQEVIDGKLTEHFPLVVWQTGSGTQSNMNANEVISNRAIEMLGGEMGTKKPVHPNDHVNMSQSSNDTYPTAMHIACVEEIVHHLLPALKHLHTALEAKVKQFEKIIKIGRTHTQDATPLTLGQEFSGYAAQVASAIANIELTLPALSKLAQGGTAVGTGLNAPVGFAEKVAEEISEITGLSFVTAPNKFEALASHDSMVFSHGAINAAAAALFKIANDIRFLGSGPRAGLGELSLPENEPGSSIMPGKVNPTQSEALTQVCAHIFGNNAALSFAGSQGHFELNVYNPMMAYNFLQSVQLLGDAAVSFTDNCVVGIEAREDNIRKGVENSLMLVTALNGKLGYDICAKIAKTAHKNGTTLREEAVGGGYLTNEEFDQYVRPENMIGPK GT:EXON 1|1-463:0| SW:ID FUMC_AGRT5 SW:DE RecName: Full=Fumarate hydratase class II; Short=Fumarase C; EC=4.2.1.2; SW:GN Name=fumC; OrderedLocusNames=Atu1616; ORFNames=AGR_C_2979; SW:KW Complete proteome; Cytoplasm; Lyase; Tricarboxylic acid cycle. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->463|FUMC_AGRT5|0.0|100.0|463/463| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0006099|"GO:tricarboxylic acid cycle"|Tricarboxylic acid cycle| PROS 317->326|PS00163|FUMARATE_LYASES|PDOC00147| SEG 54->63|aaaranmala| SEG 280->293|ainaaaaalfkian| BL:PDB:NREP 1 BL:PDB:REP 5->463|3e04D|e-157|61.3|455/458| RP:PDB:NREP 1 RP:PDB:REP 3->463|3e04B|e-131|62.8|452/454| RP:PFM:NREP 2 RP:PFM:REP 18->331|PF00206|2e-53|44.6|287/302|Lyase_1| RP:PFM:REP 408->459|PF10415|9e-13|61.5|52/55|FumaraseC_C| HM:PFM:NREP 2 HM:PFM:REP 12->342|PF00206|4.9e-113|51.9|310/312|Lyase_1| HM:PFM:REP 408->462|PF10415|3.4e-24|56.4|55/55|FumaraseC_C| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00206|IPR000362| GO:PFM GO:0006099|"GO:tricarboxylic acid cycle"|PF10415|IPR018951| GO:PFM GO:0016829|"GO:lyase activity"|PF10415|IPR018951| RP:SCP:NREP 1 RP:SCP:REP 5->459|1fuoA|e-143|53.4|455/456|a.127.1.1| HM:SCP:REP 4->462|1j3uA_|1.7e-163|41.5|458/462|a.127.1.1|1/1|L-aspartase-like| OP:NHOMO 1445 OP:NHOMOORG 946 OP:PATTERN 11----1211111111-111----11111111-11---------------11-1------1112--11 1111122222322211111-11111211111111111246111112212222323111--11121132111-111111----1-1---1111-211--1322111111111-1-11-11111111---111---1111111---11111111111111111111111111111111111111111111----22444444342344444223332443-1221111111112111111111111111111111-112222-111221122-11211-----------------------------------------------1--23------------22-----1-221---1111-1-11-11111---211111211112123111112111122222222221-3323322221112221232214112111111311121121111111111111111111111111111111111111111111-11-111-111112222221111111121111112211212-2111-11122112222111---212222222111122212-2123-323321111111122221212-42142122222221222222211--111222111111112222212----11---1222-21111------22222222222222222-2222422222222222222222332222222222222222222222222222222222222222211211111111111121322222222222222222222-2122213333343323333233211111111111113222222221111111111111111----221111--------1---------------------------11-111111111- ----211-----1121111111111111111111111111111111111112121111111111211112113121111112122111-12111111111111221-1112121-111112--111121291-21111111111-1111111111111221-12112512712331-12S222113--31311131113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 463 STR:RPRED 100.0 SQ:SECSTR cccEEEEccTTEEEEEETTccccHHHHHHHHHccccGGcccHHHHHHHHHHHHHHHHHHGGGTTccHHHHHHHHHHHHHHHTTccGGGccccccccTTcHHHHHHHHHHHHHHHHHHTTccTTcccccccccccTTTccHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTcEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTcTTTTEEcTTcTTTcccTTccTTHHHHHHHHHHHHHTcccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccccccEEcccccccccccTTccccHHHHHHHHHHHHHHHHHHHHHHHHHTccTTccccHHHHHHHHHHHHHHHHHHHHHHHHHTGGGcEEcHHHHHHHHHHccTTGGGGHHHHccHHHHHHHHHHHHHTccHHHHHHHHTcccHHHHHHHccGGGccccc DISOP:02AL 1-2,462-464| PSIPRED cccccEEEEcccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHccHHHHcccc //