[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : gda
DDBJ      :gda          guanine deaminase
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  392/915 : Eukaryota  169/199 : Viruses  0/175   --->[See Alignment]
b.92.1c.1.9
:436 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->432 2oodA PDBj 2e-65 35.8 %
:RPS:PDB   1->429 3e0lA PDBj 2e-49 29.1 %
:RPS:SCOP  21->86 2gokA1  b.92.1.10 * 6e-12 16.7 %
:RPS:SCOP  71->366 1j6pA2  c.1.9.9 * 1e-49 26.0 %
:RPS:SCOP  359->429 2icsA1  b.92.1.8 * 1e-05 19.4 %
:HMM:SCOP  71->372 1j6pA2 c.1.9.9 * 3.2e-77 36.5 %
:RPS:PFM   199->388 PF01979 * Amidohydro_1 1e-08 35.8 %
:HMM:PFM   68->387 PF01979 * Amidohydro_1 6.4e-36 30.7 270/328  
:BLT:SWISS 6->429 GUAD_ECOLI e-110 45.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88058.1 GT:GENE gda GT:PRODUCT guanine deaminase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2293053..2294363 GB:FROM 2293053 GB:TO 2294363 GB:DIRECTION + GB:GENE gda GB:PRODUCT guanine deaminase GB:PROTEIN_ID AAK88058.1 GB:DB_XREF GI:15157482 GB:GENE:GENE gda LENGTH 436 SQ:AASEQ MSMVLLRGRLLSFRRAPLSIDDTQSYLYIEDGGLLLENGRIAAIGEYADIRETAPEDVEEKDHRPHLIVPGLIDMHLHFPQMQVIGSYAANLLEWLNTYTFPEECRFVESAHAQRIATHFYDELLRHGTTTAAAYCSVHKTSADAFFTEAMKRNMLMIGGKVMMDRNAPQGLLDTPETSYDETRQVIADWHGRGRNHVAITPRFAITSTPKQMEAAQALAQEFPDLFIQTHLSENLDEIKYTCELYPEATDYTDIYVRYGLMGNKTLLGHAIHLSDREADVLSETGAVAVHCPTSNLFIGSGLFPMKKLQRREKPVRIAVATDIGGGSSYSMLRTMDEAYKIQQLLGERLNPLESWYLMTRGNAEALSMVDRIGTLEAGTDADITVLNASSTPAMALKMEVVKSLTEELFLMLTMGDDRTVVETYVAGRAMKSVLA GT:EXON 1|1-436:0| BL:SWS:NREP 1 BL:SWS:REP 6->429|GUAD_ECOLI|e-110|45.5|422/439| BL:PDB:NREP 1 BL:PDB:REP 1->432|2oodA|2e-65|35.8|427/453| RP:PDB:NREP 1 RP:PDB:REP 1->429|3e0lA|2e-49|29.1|419/442| RP:PFM:NREP 1 RP:PFM:REP 199->388|PF01979|1e-08|35.8|159/271|Amidohydro_1| HM:PFM:NREP 1 HM:PFM:REP 68->387|PF01979|6.4e-36|30.7|270/328|Amidohydro_1| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF01979|IPR006680| RP:SCP:NREP 3 RP:SCP:REP 21->86|2gokA1|6e-12|16.7|66/103|b.92.1.10| RP:SCP:REP 71->366|1j6pA2|1e-49|26.0|265/281|c.1.9.9| RP:SCP:REP 359->429|2icsA1|1e-05|19.4|62/101|b.92.1.8| HM:SCP:REP 71->372|1j6pA2|3.2e-77|36.5|277/0|c.1.9.9|1/1|Metallo-dependent hydrolases| OP:NHOMO 904 OP:NHOMOORG 597 OP:PATTERN --1-1-----------11-----1222211211-111111111-----11-1111112221---1--- --2-----------2----------2------4----322-212-----11-111------12-112211------------111111-----211----------1-----------------------------11111---1--------11------------111--------------11--11-1--11111111111111122----111---1---------22--------------------2-1----1-------------------------1--11111111111-------------1---------11112111-1-12-113--111---11-1--21111143122211111--11-111--------212--------11111111111-5323223221--21131122113221---1321111232333333331221--------------------------------------1-----2223222111133322222223233332--22222-11311111-31111122---------1221-21----21211111-11-----1----1121-------------------------221--1111-2---------2------1--1----11---------1-14-11111111111-111111111111111111-222----1----------------1------11----------------111111111111312---------------1112112-2-23444433333222423331---------2333-----1-11111111111111-----11--1111-------------------------------------1212111111-1 ----22--211-11111113232333311111-11111111111112222223212222222121-11111112111-1111111111-25211221112211111-15121311121111-1121131791132211111111-11111111211311----21111114--11122-----221--12--1-44441 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 432 STR:RPRED 99.1 SQ:SECSTR ccEEEEEEEEEccTEEEEEEcccccEEEEEEEEEEcTTccEEEEEEGGGHHHTccGGGEEEccTTcEEEEcEEEEEEEGGGGGGTTcccccHHHHHHHTHHHHHHGGGcHHHHHHHHHHHHHHHHHTTEEEEEEEccccHHHHHHHHHHHHHHTcEEEEEcEEcccccccTTcccHHHHHHHHHHHHHHHHTTccccEEEEEEEcccccHHHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHccccccHHHHHHTTTcccTTEEEEEcTTccHHHHHHHHHHTcEEEEcHHHHHHTTcccHHccHHHHHHTTcEEEEcccTTTcccccHHHHHHHHHHHHHHHHHTccHHHHHHHHTHHHHHHTTcTTTcccccTTccccEEEEcTTcTccccTTTTcccTTcTcHHHHHHHccTTTEEEEEETTEEcE#### DISOP:02AL 434-436| PSIPRED cccEEEEcEEEEEEccEEEEcccccEEEEcccEEEEEccEEEEEccccccccccccccEEEEccccEEEcccccHHHHHHHHHccccccccHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHHHEEcEEEEEccccccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHccccccHHHHHHHcccccccEEEEEcccccHHHHHHHHHcccEEEEEcHHHHHHHcccccHHHHHHccccEEEEEEccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHcHHHHHccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHccccccEEEEEEccEEEccccc //