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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : glmS.2
DDBJ      :glmS         glucosamine--fructose-6-phosphate aminotransferase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  753/915 : Eukaryota  185/199 : Viruses  2/175   --->[See Alignment]
c.80.1
:340 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->329 3fj1D PDBj 3e-73 48.1 %
:RPS:PDB   13->338 2amlB PDBj 5e-47 20.4 %
:RPS:SCOP  5->335 1jxaA1  c.80.1.1 * 3e-59 23.3 %
:HMM:SCOP  3->339 1j5xA_ c.80.1.1 * 9.7e-64 31.9 %
:RPS:PFM   59->158 PF01380 * SIS 3e-08 34.0 %
:RPS:PFM   204->289 PF01380 * SIS 4e-05 27.9 %
:HMM:PFM   42->162 PF01380 * SIS 2.2e-16 25.0 120/131  
:HMM:PFM   201->290 PF01380 * SIS 2.9e-14 31.5 89/131  
:BLT:SWISS 5->340 GLMS_AQUAE 1e-27 30.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88329.1 GT:GENE glmS.2 GT:PRODUCT glucosamine--fructose-6-phosphate aminotransferase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2585684..2586706 GB:FROM 2585684 GB:TO 2586706 GB:DIRECTION + GB:GENE glmS GB:PRODUCT glucosamine--fructose-6-phosphate aminotransferase GB:PROTEIN_ID AAK88329.1 GB:DB_XREF GI:15157807 GB:GENE:GENE glmS LENGTH 340 SQ:AASEQ MTTLMRQEIDEIPDAVARLLDNAKTDFLEAGSKLKARDPAVVVTIARGSSDHAAHFLKYAIELQTGLPVASLGPSLASIYQTKLRLERAAAFAVSQSGKSPDIVALAQSARKGGALTFSLVNTLPSPLGEAADHAINIQAGPEKAVAATKSFVNSIVAGLAILAEWTEDSLLARAVSALPQNFAKAIALDWSHIGEAVKGEESLYMLGRGPALAIAAEAALKCKETCELHAEAYSSAEVMHGPVSLVAPQFPVIAFAARDRAETSVTDIAASLANKGANVFVTSTKGSPAKPLPFVETNHPLTDALLLIAPFYGFIEQLSRARGFNPDAPVALKKVTETQ GT:EXON 1|1-340:0| BL:SWS:NREP 1 BL:SWS:REP 5->340|GLMS_AQUAE|1e-27|30.4|326/592| SEG 212->221|alaiaaeaal| BL:PDB:NREP 1 BL:PDB:REP 6->329|3fj1D|3e-73|48.1|320/326| RP:PDB:NREP 1 RP:PDB:REP 13->338|2amlB|5e-47|20.4|323/353| RP:PFM:NREP 2 RP:PFM:REP 59->158|PF01380|3e-08|34.0|100/131|SIS| RP:PFM:REP 204->289|PF01380|4e-05|27.9|86/131|SIS| HM:PFM:NREP 2 HM:PFM:REP 42->162|PF01380|2.2e-16|25.0|120/131|SIS| HM:PFM:REP 201->290|PF01380|2.9e-14|31.5|89/131|SIS| GO:PFM:NREP 4 GO:PFM GO:0005529|"GO:sugar binding"|PF01380|IPR001347| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01380|IPR001347| GO:PFM GO:0005529|"GO:sugar binding"|PF01380|IPR001347| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01380|IPR001347| RP:SCP:NREP 1 RP:SCP:REP 5->335|1jxaA1|3e-59|23.3|330/368|c.80.1.1| HM:SCP:REP 3->339|1j5xA_|9.7e-64|31.9|323/329|c.80.1.1|1/1|SIS domain| OP:NHOMO 1343 OP:NHOMOORG 996 OP:PATTERN 11211-11222222221211111-211212-2111-11111111111111-1-1-1121-1---2-11 132-211111111121111-1111131111111222111121112112111111211111221-222223111111111111-11-11--111---1--111111111111111111-1-11111111122111121222211122211111111111111-1111111111-1-1---11112221-22111111111111111111121--11111--1-112222221211111111111111111111111-11111111--1111111111111111-111111----11---------1--------111111111111111111111111111111111111112111-1111--1111111121111123311-111112111111111111111111112-11311221241122222233323311111-221111222111111111111-1-111-----------------------11111-21-11111-54555523333554244443355211211111111111111111-1111--2111111111---111---1111--11111111221121--1-21-1-1111-----111111111111111111111121131122222211222212112111-111-111-11111111111111111111-11-11111111111111112121111111111111111111111111111111111111111111--11-----1111111111111111111-1111111111---1-12222212211111111122222222211111111111111123222222222222111-1111-----------1--------------------------111111311111- 1-11111-31--222111111111121111111-1-1111-111111111111111111111111111-1111112212211111111-12111112111211122121112222211111222431313B2-325111122-22122112--31321225A21111811323121111H111-121221111531111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--- STR:NPRED 340 STR:RPRED 100.0 SQ:SECSTR ccTcGcccHHHTTHHHHHHHHHHHHHHHHHHHHHcTTcccEEEEEEcHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHccccTTTccEEEEEccccccHHHHHHHHHHHHccccEEEEEccTTcGGGGGccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTcccEEEEEcTTHHHHHHHHHHHHHHHTcccEEEEEETTGGGTGGGGccTTcEEEEEEcccTTHHHHHHHHHHHTTTcccEEEEEEcccccTTEEEEcccccTTTTHHHTHHHHHHHHHHHHHTTccTTccccHTcccccH DISOP:02AL 337-338| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEHHHHHHccccccccccEEEEEEcccccHHHHHHHHHHHHcccEEEEEEccccccHHHHccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHcHHHEEEEHHHHccccEEEEccccEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEEccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEc //