[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : glnA.2
DDBJ      :glnA         glutamine synthetase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  772/915 : Eukaryota  130/199 : Viruses  0/175   --->[See Alignment]
d.128.1d.15.9
:479 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   104->473 1f1hA PDBj 6e-36 33.1 %
:RPS:PDB   33->473 2bvcA PDBj 4e-97 26.0 %
:RPS:SCOP  36->135 1f1hA1  d.15.9.1 * 3e-18 17.8 %
:RPS:SCOP  145->473 1f1hA2  d.128.1.1 * 1e-83 31.9 %
:HMM:SCOP  33->142 1f52A1 d.15.9.1 * 4.2e-19 36.0 %
:HMM:SCOP  142->476 1htqA2 d.128.1.1 * 1.3e-106 41.4 %
:RPS:PFM   101->135 PF03951 * Gln-synt_N 5e-07 60.0 %
:RPS:PFM   145->398 PF00120 * Gln-synt_C 1e-44 39.5 %
:HMM:PFM   143->398 PF00120 * Gln-synt_C 1.1e-80 40.9 254/258  
:HMM:PFM   103->135 PF03951 * Gln-synt_N 2.3e-09 48.5 33/84  
:BLT:SWISS 29->478 PUUA_ECOLI 1e-58 33.0 %
:PROS 278->293|PS00181|GLNA_ATP
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86413.1 GT:GENE glnA.2 GT:PRODUCT glutamine synthetase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(588760..590199) GB:FROM 588760 GB:TO 590199 GB:DIRECTION - GB:GENE glnA GB:PRODUCT glutamine synthetase GB:PROTEIN_ID AAK86413.1 GB:DB_XREF GI:15155547 GB:GENE:GENE glnA LENGTH 479 SQ:AASEQ MPAKKTMLRPKKQATMAKKSPPLDLSSTRGVSSWREAAQWLRVRGIEDIECITPDLAGVARGKMMPTAKFTGDTSLALPSALYRHTISGEYPDETANFRYEPRDSDLKLVPDLSTLSVVPWESDPTAQVICDVVDAEGNFVPYTPRNVLKNVLSLYTEKGWKPVVAPEIEFYLVAMNDDPDYPLHPPKGRSGRSIVGGQSYSIAGINEFDELIDDIYHFSEKQGLEIDTLIHEEGPAQLEINLRHGDPIELADQVFLFKRTIREAALKHGIYATFMAKPMQGQPGSAMHIHQSVVEIDGGRNIFSNADGSPSKVFFSFVGGMQRYVPNALVMLAPYVNSYRRLTPDMACPVNNAWGYDNRTTAFRVPISSPQARRVENRLPSSDANPYLALAASLGCGWLGIVNNIEPTEPTADTANEGSIELPRGLLEAVALLEGEEQFDRVFGHEFVGLYAGLKRGEFETFMQVISPWEREFLLLNV GT:EXON 1|1-479:0| BL:SWS:NREP 1 BL:SWS:REP 29->478|PUUA_ECOLI|1e-58|33.0|443/472| PROS 278->293|PS00181|GLNA_ATP|PDOC00162| SEG 426->438|glleavallegee| BL:PDB:NREP 1 BL:PDB:REP 104->473|1f1hA|6e-36|33.1|366/468| RP:PDB:NREP 1 RP:PDB:REP 33->473|2bvcA|4e-97|26.0|431/475| RP:PFM:NREP 2 RP:PFM:REP 101->135|PF03951|5e-07|60.0|35/80|Gln-synt_N| RP:PFM:REP 145->398|PF00120|1e-44|39.5|248/256|Gln-synt_C| HM:PFM:NREP 2 HM:PFM:REP 143->398|PF00120|1.1e-80|40.9|254/258|Gln-synt_C| HM:PFM:REP 103->135|PF03951|2.3e-09|48.5|33/84|Gln-synt_N| GO:PFM:NREP 5 GO:PFM GO:0004356|"GO:glutamate-ammonia ligase activity"|PF03951|IPR008147| GO:PFM GO:0006542|"GO:glutamine biosynthetic process"|PF03951|IPR008147| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF03951|IPR008147| GO:PFM GO:0004356|"GO:glutamate-ammonia ligase activity"|PF00120|IPR008146| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF00120|IPR008146| RP:SCP:NREP 2 RP:SCP:REP 36->135|1f1hA1|3e-18|17.8|90/100|d.15.9.1| RP:SCP:REP 145->473|1f1hA2|1e-83|31.9|326/368|d.128.1.1| HM:SCP:REP 33->142|1f52A1|4.2e-19|36.0|100/0|d.15.9.1|1/1|Glutamine synthetase, N-terminal domain| HM:SCP:REP 142->476|1htqA2|1.3e-106|41.4|333/374|d.128.1.1|1/1|Glutamine synthetase/guanido kinase| OP:NHOMO 1848 OP:NHOMOORG 968 OP:PATTERN 11-11123323333331121111111111112111111111112113121222111111111111-22 2234322322222324444-45222A444442999933544443322222224323231123424243432222222211114111111111-1------------111---------------------------333332112411141111222111121111211221111111111112111121132111111-111111111221111111122311211111122111111111111111211111111221111111112211111111111111111111111111111111111111111111111111111131-1-------1-2----111-1-1--11113115362132411-11--11-333122222124341113113133333333334-341333323862555455455576451113545555657111111114111313422221222221---11---------11113122311111145545422222443533332345211311111233111124214111141342111111111112211211111-11111-11111111111112211111111111111111111111111111221111211113433322322222223233---1123------13111112221211122-2222211222212222221222111111111111111111111422222222111111111111111-1-----222211353111111111-1111122212221114177779787989884455---------31112111111211122333334441111111-111111------------------------------------22122121111-- 111122--1---112211224525252332212223222212221222132334221221111-----------------------1--34213211111111112--11-1-1122-11-12-11111261-21211111-11111-1-21-1-2112---48---------11---------15111112-1----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 438 STR:RPRED 91.4 SQ:SECSTR ################################cHHHHHHHHHHTTccEEEEEEEcccccEEEEEEEGGGcEE#####EcHHHHHTcEEEETTccTTcTcccGGGcEEEEEEcGGGcEEcccccccEEEEEEEEEcTTccccTTcHHHHHHHHHHHHHHHcccEEEEEEEcEEEEcEEEccccEEEEEEcTTcGGGTTccccccTTTcccHHHHHHHHHHHHHTTccEEEEEEcccTTEEEEEEccEEHHHHHHHHHHHHHHHHHHHHHTTcEEEccccccTTcccccEEEEEEEEETTEEccccTTcGGGccHHHHHHHHHHHHHHHHHHHHHcccTTHHHHccTTccccccccEEETcTTccEEEccccTTcccEEEccccccccHHHHHHHHHHHHHHHHHTTccccccccccGGGTcccccccHHHHHHHHHHccHHGGcccHHHHHHHHHHHHHTHHHHHTcccHHHHHTc#### DISOP:02AL 1-24| PSIPRED ccccHHHccccccccccccccccccHHHHccccHHHHHHHHHHccccEEEEEEEccccEEEEEEEEHHHHHccccccccHHHcccccccccccccccccccccccEEEEEEEcccEEEccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHcccEEEEEcccEEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHcccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccEEEEEEEEEEccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccccccccccEEEcccccEEEEEEccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcc //