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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : glnA.4
DDBJ      :glnA         glutamine synthetase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  768/915 : Eukaryota  134/199 : Viruses  0/175   --->[See Alignment]
d.128.1d.15.9
:454 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   69->410 2wgsA PDBj 7e-44 37.6 %
:RPS:PDB   5->452 2bvcA PDBj 6e-99 31.6 %
:RPS:SCOP  5->117 1f1hA1  d.15.9.1 * 9e-19 20.2 %
:RPS:SCOP  118->452 1f1hA2  d.128.1.1 * 2e-81 31.2 %
:HMM:SCOP  5->116 1f52A1 d.15.9.1 * 7.3e-20 34.7 %
:HMM:SCOP  116->453 1f52A2 d.128.1.1 * 6.6e-110 43.2 %
:RPS:PFM   58->109 PF03951 * Gln-synt_N 2e-06 56.9 %
:RPS:PFM   119->371 PF00120 * Gln-synt_C 1e-42 41.6 %
:HMM:PFM   117->371 PF00120 * Gln-synt_C 7.3e-78 39.5 253/258  
:HMM:PFM   80->108 PF03951 * Gln-synt_N 1.8e-06 62.1 29/84  
:BLT:SWISS 27->452 GLNA2_DICDI 1e-59 33.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87889.1 GT:GENE glnA.4 GT:PRODUCT glutamine synthetase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2106378..2107742) GB:FROM 2106378 GB:TO 2107742 GB:DIRECTION - GB:GENE glnA GB:PRODUCT glutamine synthetase GB:PROTEIN_ID AAK87889.1 GB:DB_XREF GI:15157281 GB:GENE:GENE glnA LENGTH 454 SQ:AASEQ MTSYTFDALKMDVAEGRIDTVLACLVDMQGRLMGKRFQAEFFVESAFEETHSCNYVLATDMEMETVPGYKSSSWEKGYGDYTLKPDLSTLRKVPWLEGTALVLCDVLDHHTHEEVPHSPRALLKKQVARLEAMGLKAYMATELEFFLFDQTFDAARASGYKDLNLASGYNEDYHIFQTTKEEDVMRALRKGLQGAGIPVENSKGEASPGQAEINVRYAEALTMADRHAIIKNATKEIAWSKGKAVTFLAKWNYNAAGSSSHIHQSLWSLDGKPAFLDKDGEHGMSDVMRHYVAGLLAHASDITYFLAPYINSYKRFMAGTFAPTKAIWSLDNRTAGYRLCGAETKGIRIECRVGGSDLNPYLAMAALLAAGIDGIENKLELEPAFVGDAYGGKDVREIPKTLRDATAFLDGSKMLRQAFGDDVVDHYVHAARWEQEEYDRRVTDWEVARGFERA GT:EXON 1|1-454:0| BL:SWS:NREP 1 BL:SWS:REP 27->452|GLNA2_DICDI|1e-59|33.6|423/521| BL:PDB:NREP 1 BL:PDB:REP 69->410|2wgsA|7e-44|37.6|335/463| RP:PDB:NREP 1 RP:PDB:REP 5->452|2bvcA|6e-99|31.6|434/475| RP:PFM:NREP 2 RP:PFM:REP 58->109|PF03951|2e-06|56.9|51/80|Gln-synt_N| RP:PFM:REP 119->371|PF00120|1e-42|41.6|245/256|Gln-synt_C| HM:PFM:NREP 2 HM:PFM:REP 117->371|PF00120|7.3e-78|39.5|253/258|Gln-synt_C| HM:PFM:REP 80->108|PF03951|1.8e-06|62.1|29/84|Gln-synt_N| GO:PFM:NREP 5 GO:PFM GO:0004356|"GO:glutamate-ammonia ligase activity"|PF03951|IPR008147| GO:PFM GO:0006542|"GO:glutamine biosynthetic process"|PF03951|IPR008147| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF03951|IPR008147| GO:PFM GO:0004356|"GO:glutamate-ammonia ligase activity"|PF00120|IPR008146| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF00120|IPR008146| RP:SCP:NREP 2 RP:SCP:REP 5->117|1f1hA1|9e-19|20.2|99/100|d.15.9.1| RP:SCP:REP 118->452|1f1hA2|2e-81|31.2|333/368|d.128.1.1| HM:SCP:REP 5->116|1f52A1|7.3e-20|34.7|98/0|d.15.9.1|1/1|Glutamine synthetase, N-terminal domain| HM:SCP:REP 116->453|1f52A2|6.6e-110|43.2|336/0|d.128.1.1|1/1|Glutamine synthetase/guanido kinase| OP:NHOMO 1828 OP:NHOMOORG 968 OP:PATTERN 11-11123323333331121111111111112111111111112112121112111111111111-22 2133322322222324444-45223A4444429999335544433222222243232311234242344322222222111141111111----------------111---------------------------333331112411141111222111211111211221111111111112111121132111111-11111111122111111112231121111112211111111111111121111111122111111111221111111111111111111111111111111111111111111111111111112--1----111-11-----1111-1--11113115362132411-11--11-333122222124341113113133333333334-34133332386255545545557645111354555565711111111411131342211122211---------------11113122311111145545422222443533332345211311111233111124214111141342111111111112211211111-11111-11111111111112211111111111111111111111111111221111211113433322322222223233---1123------13111112221211122-2222211222212222221222111111111111111111111422222221111111111111111-1-----222211353111111111-1111122212221114188889887989884455---------31112111111211122333334441111111-111111------------------------------------22122121111-- 111122--1---112211124424231111212121112112211122122233121222221-----------------------1--35213251111111112--21-111122-11-12-11111271-21211111-1111111-211112112---48---------1--1-------14111112-1----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 450 STR:RPRED 99.1 SQ:SECSTR ####cHHHHHHHHHHTTccEEEEEEEcccccEEEEEEEGGGccHHHHHTcEEEEEEEcccGGGcEEETTccTTcccGGcEEEEEEcGGGcEEccccccEEEEEEEEEcTTTccccTTcHHHHHHHHHHHHHHHccEEEEEEEEcEEEEcEEEEEEccccEccccTTccccccccccTTcccHHHHHHHHHHHHHTTccEEEEEEcccTTEEEEEEccEEHHHHHHHHHHHHHHHHHHHHHTTcEEEccccccTTcccccEEEEEEEEEHTTEEccccTTcGGGccHHHHHHHHHHHHHHHHHHHHHcccTTHHHHccTTccccccccEEETcTTccEEEccccTTcccEEEccccccccHHHHHHHHHHHHHHHHHTTccccccccccGGGHHTcccccccHHHHHHHHHHccHHHHGccHHHHHHHHHHHHHTHHHHHTcccHHHHHHHTTHH DISOP:02AL 1-2| PSIPRED cccccHHHHHHHHHHccccEEEEEEEccccEEEEEEEEHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEccccEEccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHcccEEEEEccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccEEEEEEEEEEccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccccccccccEEEcccccEEEEEEccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccc //