[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : glnA.5
DDBJ      :glnA         glutamine synthetase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  75/915 : Eukaryota  173/199 : Viruses  1/175   --->[See Alignment]
d.128.1d.15.9
:344 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->333 3fkyC PDBj 1e-78 49.8 %
:RPS:PDB   3->332 2d3aA PDBj 7e-79 46.3 %
:RPS:SCOP  6->90 1f1hA1  d.15.9.1 * 2e-15 20.0 %
:RPS:SCOP  104->330 1f1hA2  d.128.1.1 * 2e-39 27.2 %
:HMM:SCOP  39->90 1f52A1 d.15.9.1 * 3.3e-07 46.2 %
:HMM:SCOP  91->333 1htqA2 d.128.1.1 * 1.8e-55 30.8 %
:RPS:PFM   9->81 PF03951 * Gln-synt_N 9e-06 47.0 %
:RPS:PFM   103->330 PF00120 * Gln-synt_C 2e-25 37.6 %
:HMM:PFM   102->332 PF00120 * Gln-synt_C 1.5e-52 27.1 225/258  
:HMM:PFM   6->84 PF03951 * Gln-synt_N 3.3e-21 38.4 73/84  
:BLT:SWISS 1->344 GLNA2_BRAJA 0.0 84.6 %
:PROS 43->60|PS00180|GLNA_1
:PROS 217->234|PS00181|GLNA_ATP

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88152.2 GT:GENE glnA.5 GT:PRODUCT glutamine synthetase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2386484..2387518 GB:FROM 2386484 GB:TO 2387518 GB:DIRECTION + GB:GENE glnA GB:PRODUCT glutamine synthetase GB:PROTEIN_ID AAK88152.2 GB:DB_XREF GI:159140471 GB:GENE:GENE glnA LENGTH 344 SQ:AASEQ MTKFKLEYIWLDGYKPVANLRGKTQIKEFDEFPTLEQLPLWGFDGSSTQQAEGHSSDCVLKPVAIYPDPARTNGALVMCEVMMPDGVTPHASNSRATILEDEDAWFGFEQEYFFYQDGRPLGFPEQGYPAPQGPYYTGVGFKNVGSVAREIVEEHLDLCLEAGINHEGINAEVAKGQWEFQVFGKGSKRAADQIWIARYLLLRLCEQYGIDVEFHCKPLGDTDWNGSGMHCNFSTKFMREVGGKDYFEALMAAFAKNWQEHIDVYGPDNHLRLTGKHETAPWNKFSYGVADRGASIRVPHSFVNNGYRGYLEDRRPNSQGCPYQIASVVLKTIAEVPLAKSAAA GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 1->344|GLNA2_BRAJA|0.0|84.6|344/344| PROS 43->60|PS00180|GLNA_1|PDOC00162| PROS 217->234|PS00181|GLNA_ATP|PDOC00162| BL:PDB:NREP 1 BL:PDB:REP 7->333|3fkyC|1e-78|49.8|315/342| RP:PDB:NREP 1 RP:PDB:REP 3->332|2d3aA|7e-79|46.3|322/353| RP:PFM:NREP 2 RP:PFM:REP 9->81|PF03951|9e-06|47.0|66/80|Gln-synt_N| RP:PFM:REP 103->330|PF00120|2e-25|37.6|218/256|Gln-synt_C| HM:PFM:NREP 2 HM:PFM:REP 102->332|PF00120|1.5e-52|27.1|225/258|Gln-synt_C| HM:PFM:REP 6->84|PF03951|3.3e-21|38.4|73/84|Gln-synt_N| GO:PFM:NREP 5 GO:PFM GO:0004356|"GO:glutamate-ammonia ligase activity"|PF03951|IPR008147| GO:PFM GO:0006542|"GO:glutamine biosynthetic process"|PF03951|IPR008147| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF03951|IPR008147| GO:PFM GO:0004356|"GO:glutamate-ammonia ligase activity"|PF00120|IPR008146| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF00120|IPR008146| RP:SCP:NREP 2 RP:SCP:REP 6->90|1f1hA1|2e-15|20.0|80/100|d.15.9.1| RP:SCP:REP 104->330|1f1hA2|2e-39|27.2|217/368|d.128.1.1| HM:SCP:REP 39->90|1f52A1|3.3e-07|46.2|52/0|d.15.9.1|1/1|Glutamine synthetase, N-terminal domain| HM:SCP:REP 91->333|1htqA2|1.8e-55|30.8|234/374|d.128.1.1|1/1|Glutamine synthetase/guanido kinase| OP:NHOMO 417 OP:NHOMOORG 252 OP:PATTERN -------------------1----------------11------------------------------ -12-1--1----------------------------1----111-----------------------111-------------------------------1--1111-------------------------------11------------------------------------------111-------------------------1111-----------------1--------------------------------------------------------------------------------------------------------------------------------------------1-1----------1111---1111-----------1-11111111-1--111111111111-1-----1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-----------------------------------------------------111111111--------------------------------------------------------------------------------------1- ------1-211----11121111111111111111111111111111111111122222222111111-11111121-1111111111-11111112111111242--413592132-1311111-1215C3-111111121121-1-1-11111222424431215625456211441F---24649C16211222-1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 342 STR:RPRED 99.4 SQ:SECSTR ##cEEEEEEEEcTTcccccEEEEEEEEcccccccGGGcccEEEEGGGTTcccccccEEEEEEEEEEEcTTcTTcEEEEEEEEcTTcccccTTccHHHHHHHHccEEEEEEEEEEEETTTcTTccTTcccccccccTTcccTTTcHcccHHHHHHHHHHHHHHTccEEEEEEcccTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEEcccccccccccccccEEEEEEcTTTccTTHHHHHHHHHHHHHHTHHHHHTTccTTHHHHcccccccccTTcccEEcccTTccEEccHHcHHHTTcccEEEccccTTccHHHHHHHHHHHHccccccccccc DISOP:02AL 341-345| PSIPRED ccEEEEEEEEEEEEccccccEEEEEEEcccccccHHHccccccccccccccccccccEEEEccEEEEcccccccEEEEEEEEEccccccccccHHHHHHHcccccEEEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHcccccccccccccEEccccccccEEEEccccccccccEEEEEccccccccHHHHHHHHHHHcccccccccccc //