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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : glpK.1
DDBJ      :glpK         glycerol kinase 2
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  700/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.55.1
:489 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->479 3ezwD PDBj 2e-76 39.2 %
:RPS:PDB   4->479 2dpnA PDBj 4e-94 37.3 %
:RPS:SCOP  4->244 2p3rA1  c.55.1.4 * 5e-61 37.8 %
:RPS:SCOP  247->479 1bo5O2  c.55.1.4 * 2e-34 29.6 %
:HMM:SCOP  2->246 1r59O1 c.55.1.4 * 4.3e-74 40.0 %
:HMM:SCOP  247->476 1r59O2 c.55.1.4 * 3.2e-57 38.9 %
:RPS:PFM   4->243 PF00370 * FGGY_N 1e-46 44.7 %
:RPS:PFM   253->425 PF02782 * FGGY_C 3e-22 37.3 %
:HMM:PFM   4->243 PF00370 * FGGY_N 1.8e-64 33.3 237/245  
:HMM:PFM   253->439 PF02782 * FGGY_C 7.2e-42 42.7 185/197  
:BLT:SWISS 4->418 GLPK_SYMTH 8e-92 43.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87665.1 GT:GENE glpK.1 GT:PRODUCT glycerol kinase 2 GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1880193..1881662 GB:FROM 1880193 GB:TO 1881662 GB:DIRECTION + GB:GENE glpK GB:PRODUCT glycerol kinase 2 GB:PROTEIN_ID AAK87665.1 GB:DB_XREF GI:15157020 GB:GENE:GENE glpK LENGTH 489 SQ:AASEQ MRAILSIDQGTTNSKAILVSESGELLARGSSPVGITYPQPGWVEQDPNRIWASVREAISACLAAAPSDVSVEAIAISNQRESVTIWDGETGEPLGPVLSWQCRRTAQDCADLIAKGQSERVMALTGLPIDPMFPGAKMRWLLERAPKGRKLRLGTIDSWLIHCFTGGKVHACDASNAARSQVLDLNRQVWSDELCDLFGIDINALPDLRDSSGDFGVTSGVPGIKDGTPILAAIGDSHAALFGHGAFNPGDGKVTFGTGSSVMTTLPHFIAPERGITTTVAWRLGGKPTFAFEGNILVSAASLPWMTDILGLPDVAALVELAATAEPEGPGFVPAFVGLGAPYWDTNARALFSQINFSTTRAQMARAVTDSIAFQVHDVFAAMRAQSPSGFGRLFVDGGPSQNRFLMQCVADMLEHPVIQRDAPEASALGAAYLAGLALGVWSDLNAIAALNSNGNTIATSTGESRQRLGIWRDAIARSTLPVTSGNGE GT:EXON 1|1-489:0| BL:SWS:NREP 1 BL:SWS:REP 4->418|GLPK_SYMTH|8e-92|43.8|413/498| SEG 315->326|vaalvelaatae| SEG 426->440|asalgaaylaglalg| BL:PDB:NREP 1 BL:PDB:REP 4->479|3ezwD|2e-76|39.2|462/482| RP:PDB:NREP 1 RP:PDB:REP 4->479|2dpnA|4e-94|37.3|474/492| RP:PFM:NREP 2 RP:PFM:REP 4->243|PF00370|1e-46|44.7|237/245|FGGY_N| RP:PFM:REP 253->425|PF02782|3e-22|37.3|169/191|FGGY_C| HM:PFM:NREP 2 HM:PFM:REP 4->243|PF00370|1.8e-64|33.3|237/245|FGGY_N| HM:PFM:REP 253->439|PF02782|7.2e-42|42.7|185/197|FGGY_C| GO:PFM:NREP 4 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00370|IPR018484| GO:PFM GO:0016773|"GO:phosphotransferase activity, alcohol group as acceptor"|PF00370|IPR018484| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02782|IPR018485| GO:PFM GO:0016773|"GO:phosphotransferase activity, alcohol group as acceptor"|PF02782|IPR018485| RP:SCP:NREP 2 RP:SCP:REP 4->244|2p3rA1|5e-61|37.8|241/252|c.55.1.4| RP:SCP:REP 247->479|1bo5O2|2e-34|29.6|233/246|c.55.1.4| HM:SCP:REP 2->246|1r59O1|4.3e-74|40.0|245/0|c.55.1.4|1/1|Actin-like ATPase domain| HM:SCP:REP 247->476|1r59O2|3.2e-57|38.9|229/0|c.55.1.4|1/1|Actin-like ATPase domain| OP:NHOMO 2024 OP:NHOMOORG 922 OP:PATTERN 111-1--32222212-51-----31111131-----------------------11-21111111--- 2222311122111111111-13111411111132221222-112412211-1212111--23222344321----111-1-141------1112-----1----12-413---------------11-111-11-122223---2111--11-----111121-1-11111------------441-123131322323353233333343333433323333322333233622222222222222233334334-361311233335521322132211111111--111111111111111111111111111---111233122111111131143--21112211-1221-11-1--311243221111-21111-----4-3441111121112221122225-11111111221-644264466477112113433223322111111113332--14------------------------------1311-111114666642444455454555456441122--11221111212245111----21--------1-1111122-111111111-1-1111---111113-----------------------------114122--2221111111311111121112--1211-------52331314444454544-4544554454455444447767343225335444555555554521222332-545555555555---1221121111-2325444513-1212211211111111111244341414211111211111111111-111211111112111111111---1111---1222222111111-12--------1-11-1111111111----2141148554111 11--221-425125212112222212222222222222222221222211222122211111111111-11111111111111111---12121111111111445-2213753424122115198241CV4-8573222822633222232151322325422225D55523411111C1111111421121231111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 479 STR:RPRED 98.0 SQ:SECSTR cEEEEEEEEcccEEEEEEEcTTccEEEEEEEEccEEcccTTccEEcHHHHHHHHHHHHHHHHHHTTccGGccEEEEEEcccccEEEETTTccccccEEcTTccTTHHHHHHHHHTTcHHHHHHHTcccccTTcHHHHHHHHHHHcccHHHEEEEcHHHHHHHHHTTTcccEEcHHHHTTcccEETTTTEEcHHHHHHTTcccTTccEEccTTcccccccHcHHHcccccEEEEEEHHHHHHHHTTcccTTcEEEEEcccEEEEEcTTcccccccccEEEEEEEETTEEEEEEEEEEcccHHHHHHHHHTTccccTTTHHHHHHTccccccEEEccTTcccTTTccTTcccEEEcccTTccHHHHHHHHHHHHHHHHHHHHHHHHTTTccccccEEEEcGGGGcHHHHHHHHHHHTccEEEEccccHHHHHHHHHHHHHHTcccHHHHHHHHccEEEEEcccHHHHHHHHHHHHHHHHHH########## DISOP:02AL 482-489| PSIPRED ccEEEEEEEccccEEEEEEcccccEEEEEEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccEEEEEcccccEEcccccccccccHHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHccHHHHHHHHccHHHHHHHHHHcccEEEEEcccHHHccccccccccccHHHHHHHcccHHHccccccccccEEEEEHHHccccccEEEEEccHHHHHHHHHccccccEEEEEEcccEEEEEEcccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccEEEEEEcccccccccHHHccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHccccccHHHHHHHcccccEEccccHHHHHHHHHHHHHHHHHcccccccccc //