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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : gltB.1
DDBJ      :gltB         glutamate synthase large subunit
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  642/915 : Eukaryota  133/199 : Viruses  0/175   --->[See Alignment]
b.80.4c.1.4d.153.1
:1782 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->747,938->1584 1ea0A PDBj e-109 42.1 %
:RPS:PDB   6->923 1ea0A PDBj 6e-47 24.7 %
:RPS:PDB   982->1123 3b9tD PDBj 8e-18 15.2 %
:RPS:PDB   1227->1575 1bllE PDBj 5e-25 14.1 %
:RPS:SCOP  6->371 1ea0A3  d.153.1.1 * 6e-37 28.6 %
:RPS:SCOP  377->747,938->1287 1ea0A2  c.1.4.1 * 4e-75 27.9 %
:RPS:SCOP  1302->1582 1ea0A1  b.80.4.1 * 4e-55 34.9 %
:HMM:SCOP  6->378 1llwA3 d.153.1.1 * 9.7e-108 38.0 %
:HMM:SCOP  379->1269 1ea0A2 c.1.4.1 * 2.9e-156 37.3 %
:HMM:SCOP  1295->1593 1ea0A1 b.80.4.1 * 1.3e-67 40.4 %
:RPS:PFM   143->322 PF00310 * GATase_2 1e-20 45.4 %
:RPS:PFM   407->680 PF04898 * Glu_syn_central 2e-37 33.5 %
:RPS:PFM   919->1253 PF01645 * Glu_synthase 8e-76 48.3 %
:RPS:PFM   1372->1528 PF01493 * GXGXG 4e-30 44.6 %
:HMM:PFM   942->1252 PF01645 * Glu_synthase 1.9e-101 51.1 309/368  
:HMM:PFM   407->681 PF04898 * Glu_syn_central 4.5e-63 35.1 271/288  
:HMM:PFM   6->322 PF00310 * GATase_2 1.2e-61 36.6 309/362  
:HMM:PFM   1376->1533 PF01493 * GXGXG 9e-42 46.2 158/202  
:BLT:SWISS 7->752,945->1581 GLTA_BACSU e-115 42.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK85965.2 GT:GENE gltB.1 GT:PRODUCT glutamate synthase large subunit GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 148937..154285 GB:FROM 148937 GB:TO 154285 GB:DIRECTION + GB:GENE gltB GB:PRODUCT glutamate synthase large subunit GB:PROTEIN_ID AAK85965.2 GB:DB_XREF GI:159139512 GB:GENE:GENE gltB LENGTH 1782 SQ:AASEQ MSAEGVGDGAGVSLDLSLSFFRELTGDAALPAGRFGVGNFFLPQNPAFHGEAVGIIGNALKEQGFSVLLVRDVPVNDTAIRPAAIPYQLPIRQWVFSAPVECATLAEFDWRIHKALLAIEALAYTVPDLAGFYPLSLSARTQVLKGRLNSQEVMPYFCDLTDPRHKVHTMYFHTRFSTNTDPHPSMAQPFRLMAHNGELNTDKKNRLSEAAVALAKNASIVRPKGQSDSCRLDQTLQARVMEDGLDLVTAVVSMMPPAWENDDTLSPGVKSMLEYFSLYEEKNDGPAALIFGDGTIIGARLDRLGLRPLRTVETDDYLCVMSEAGQIAFPAESVIRRGRIEAGGMLYYDHTERRAFSTVEALELLASRRDYSSLLSDARVMLGDLPEVPADKQGSPLRYNGDLERHQRYVAYSHNQESFKFLMDPMLASGAEKISAMGYGNAINALSDQEGGVAKYFSQRFAQVTNPPLDSIREADGMTLRVALGAKPNSGAKKARQIVVRSPILTHLDMLRIREQPETPVRRFEMLYTPVFDAEDANEAALRQAIDGLCGEVVAFAAEEGGIAVVTDRHVSAGRAALPMIMVVSAINQRLIEEGLRLRISLIVESGQFSSSHHIAAGLGFGASAVYPLGVQFRAEEKFGADADKAFKRFAKAAEKSLMKTMGKVGLCTAESYIGGEFFEPNFLDTSDPVLKRYFPNVKTPVGGVTFAVIAQAVADWHRKALSVKGENDIPLLGLFKERAEGAGHSYGTTAVRGFVDMTEEKIGFDKGTENEEALRLLPLNRLEDAFGLNDAAYYHNSFDRLTPDAIDAFEVTPGYRAFSRMMAEERARRPAALRDVLELPADVTFAGSAEEFRREMGRFCRHGNNSFMVRGLRCDEAADGSFRLQLIGPHGHELARLAALGQSLLDRFDDDIAGHWLEGGALMVQAKGEAFAYMSLIRTAPNSIPLETVQKASEITKTLASGAMSHGALVAAAHEAVAHGTNMVGGMSNSGEGGEHISRYGTIRASRIKQFASGRFGVWAGYLADPMLEEIEIKIGQGAKPGEGGQLPSPKVTVEIAAARGGTPGVELVSPPPHHDTYSIEDLAQLIHDAKAARVRVIVKLVSSEGIGTIAVGVAKAGADVINVAGNTGGTGAAAVTSLKYTGRAAEIGIAEVHQALCATGLRAKVLLRCSGAHQTASDVVKSALLGGDSFEFGTTALMMLKCVMAKNCNIKCPAGLTTNQEAFNGDPRALAQYLMNIAHETREILAGLGLRSLREARGRSDLLHLLDHPASVGQLDLRAMLAVVEEVKIDNPVYMEKDFALDDAFIELVRSALVDSRRENIELGGNRFLNNCNKSVGGQLAVDIERMLNHELSDEQLDALPAVKRDSRGRRFLEAGSVRIDTSGSAGQSFGAFCNDGMIMVHTGTCNDGVGKSACGGTIVVRSPGGGSKETGGNVLVGNFALFGATGGRTFVEGQAGDRFAVRNSGATAVVEGVGDFACEYMTNGAVLNLGSFGKGFGNGMSGGFVYQYDPYGDLPKKVSHDSILLGSITGEDEQAAIHNQAVHQLLTLHVAETGSAKAAWLLENWESEQHNFAYGMPRALLLYQDSDEILKAKPRKELLEELASALAGYQLRKFKLAYRDRKAVLNGTVPGYGETDTEDMYALINNYTVLSMAQAIALQRLPMASGPSDPAIEKAVRNLILTEDYALMQRLLKYAREALSDHSDQQLAVMIAAKRLDDYKQALARRNIWSVDSPGTYGWIIQQNRKNIEKIGRLPGFEELFAARAIPDLATASSHSRAA GT:EXON 1|1-1782:0| BL:SWS:NREP 1 BL:SWS:REP 7->752,945->1581|GLTA_BACSU|e-115|42.7|1328/1520| SEG 637->656|ekfgadadkafkrfakaaek| SEG 817->835|rafsrmmaeerarrpaalr| SEG 967->981|hgalvaaaheavahg| SEG 1124->1138|nvagntggtgaaavt| SEG 1490->1506|lnlgsfgkgfgngmsgg| SEG 1600->1610|elleelasala| BL:PDB:NREP 1 BL:PDB:REP 1->747,938->1584|1ea0A|e-109|42.1|1328/1452| RP:PDB:NREP 3 RP:PDB:REP 6->923|1ea0A|6e-47|24.7|871/1452| RP:PDB:REP 982->1123|3b9tD|8e-18|15.2|138/408| RP:PDB:REP 1227->1575|1bllE|5e-25|14.1|304/481| RP:PFM:NREP 4 RP:PFM:REP 143->322|PF00310|1e-20|45.4|163/175|GATase_2| RP:PFM:REP 407->680|PF04898|2e-37|33.5|269/288|Glu_syn_central| RP:PFM:REP 919->1253|PF01645|8e-76|48.3|331/342|Glu_synthase| RP:PFM:REP 1372->1528|PF01493|4e-30|44.6|157/195|GXGXG| HM:PFM:NREP 4 HM:PFM:REP 942->1252|PF01645|1.9e-101|51.1|309/368|Glu_synthase| HM:PFM:REP 407->681|PF04898|4.5e-63|35.1|271/288|Glu_syn_central| HM:PFM:REP 6->322|PF00310|1.2e-61|36.6|309/362|GATase_2| HM:PFM:REP 1376->1533|PF01493|9e-42|46.2|158/202|GXGXG| GO:PFM:NREP 9 GO:PFM GO:0008152|"GO:metabolic process"|PF00310|IPR000583| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF04898|IPR006982| GO:PFM GO:0015930|"GO:glutamate synthase activity"|PF04898|IPR006982| GO:PFM GO:0055114|"GO:oxidation reduction"|PF04898|IPR006982| GO:PFM GO:0006537|"GO:glutamate biosynthetic process"|PF01645|IPR002932| GO:PFM GO:0015930|"GO:glutamate synthase activity"|PF01645|IPR002932| GO:PFM GO:0008152|"GO:metabolic process"|PF01493|IPR002489| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01493|IPR002489| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01493|IPR002489| RP:SCP:NREP 3 RP:SCP:REP 6->371|1ea0A3|6e-37|28.6|360/419|d.153.1.1| RP:SCP:REP 377->747,938->1287|1ea0A2|4e-75|27.9|696/763|c.1.4.1| RP:SCP:REP 1302->1582|1ea0A1|4e-55|34.9|252/270|b.80.4.1| HM:SCP:REP 6->378|1llwA3|9.7e-108|38.0|366/422|d.153.1.1|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| HM:SCP:REP 379->1269|1ea0A2|2.9e-156|37.3|721/0|c.1.4.1|1/1|FMN-linked oxidoreductases| HM:SCP:REP 1295->1593|1ea0A1|1.3e-67|40.4|270/0|b.80.4.1|1/1|Alpha subunit of glutamate synthase, C-terminal domain| OP:NHOMO 1045 OP:NHOMOORG 821 OP:PATTERN ---1--1111111111-11111111--111111131111111111-211-1111-1-----1------ 11111--111111121111-13112211111233331464122111-11111111122--112111211211111111----111111--1111-----1-1-3221211---------------1111221122111111111112121112111111111112111111111111111111111111--121111111111111111111121111211-21111111111-1111111111111111-11----11---------11----1-111--------11----------------------------------11-11-------1-1--11------1--1111111111-1-111112---2111111-----131111111111111111111111-11111111112-1221111111112211122111111221111111111111311-----------------------------121211111112222221111122111111112211111-221112111211121122111111-------111111-1212221112222-1211222321111111-1--1-11111----------1111111111111212112111111111111112111---2221------1111111111111-111-1111111111111111111111111111111--1---11111121111111--111111111111---111111----11112-----------1---11111111111222221222122221111---------21112222222222222111111111111111-221111--------------------------------------1--1-111111 11----1-1---11111121111111111111111111111111111111111121111111111111-11-11121-1111111111-12111111111121212-12-2---------------------------------------------------133124113114-1222V1113262251442252112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1546 STR:RPRED 86.8 SQ:SECSTR ccTTcccccccEEEEccHHHHHHHHHHTTcccccEEEEEEEEccccHHHHHHHHHHHHHHHHTTcEEEEEEEccccGGGccHHHHHHccEEEEEEEEcTTcccHHHHHHHHHHHHHHHHHHHHHHTcccEEcEEEEEEccEEEccccccGGGHHHHcGGGGcTTccccEEEEEEccccccccccTTccccccEEEEEccTTHHHHccccTTGGGHHHHcccccTTccHHHHHHHHHHHHHHTTTccHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccEEEEEccccEEEEEccTTcccccEEEEETTcEEEEcccTTccccGGGEEEEEEccTTcEEEEETTTTEEEcHHHHHHHHHHTTTHHHHHTTcccTTHHHHHHHHTTccccccTHHHHHHHHTTTTTHccHHHHHTTTHHHHHHccccEEccccccccGGGccccccGGGTEEEcccccccccccTTTTGGGccccEEEcccccTTcccGccEEEccccccHHHHHHHHHHHGGGEEEEEcEEEcTTcTTHHHHHHHHHHHHHccccccHHHHHHTcEEEEEcTTccTTEEEccHHHHHHHHHHHHHTTTcGGGcEEEEEccccccHHHHHHHHTTTccEEEcHHHHHHHHTTTTccHHHHHHHHHHHHHHHHHHHHHTTTcccHHHHTTcccEEE#EccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHc#ccccccccccccccccccccccccHHHHHHHHHH#####HHHTcHHHHHHHH#######HHHHTcccccGGGGEEEccccccccGGGcccHHHHHTTE#################EEEEcccTTccHHHHHHHHHTTcEEEccTTcccccccTTcccccccEEEEccccTTccHHHHTcccEEEEEcccTTcTTTccEE#######cGGGGEEEccccccccGGGcccHcTTTTcccccEEEcccTTTTccHHHHHHTTEEEEEEEEcTTcTTGGGcccccEEEEEEEETTccccEEEEEEEEEEEcccEEcTTcccEEcccccTTccccGGGcccEEcTTTTccEEcccEEEEEEcccccccHEEcccccTTEEccccTTccTTcEEEEcccTTEEEEccccccccTTcccEEcccccccccHHHHHHHHHHHHHTTccEEcccEEEEccccHHHHHHHHHTTccEEEccHHHHHHccccHHHHTTcEEEEEEEEEEcTEEccTTccTTTTEEHHHHHHHHHHHHHHHHHHHTTccEEEEccTTcHHHHHHHHHHHHHccccTTccccccGccEEEEcccccHHHHHHHHHcHHHHHHHHHHHHHHccTTTccHHHHHHHHHHHHccccccccEEEccTTTccccHHHcccEEEEEEcHHHHHHTTcHHHHHHHTTccccccTTccEEcEEEEEcHHHHHHcTTcccccTTGGGGGGTTHHHHHHHHHHHHHHHTTcccEEEEEEEEEEEccccTTcccTTccEEEEccTTcHHHHHHHHHHHHGGGGcccEHHHHHHHEEEEEcccHHHHHHTTTccEcEEEEccEEEEccHHHHHHHHHHHHHHcccEGcEEEEcGG###################################################################################################################################################################################################### DISOP:02AL 1-1,491-491,1591-1607,1776-1783| PSIPRED cccccccccEEHHHHHHHHHHHHHHHccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEEEcccccHHHcHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccEEEEEEEcHHHHHHHHHHcccccccccEEEEEEcccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHccccccHHHHHHHHHHHHHcccccccEEEEEEEccEEEEEEcccccEEEEEEEEccEEEEEEccccccccHHHEEEccccccccEEEEEccccEEEccHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHccccEEEcccccccHHHHccccccHHHHHHHHHHHcccccccHHHccEEEEEEEEEccccccccccccEEEEccccccHHHHHHHHHcccccccccEEEEEcEEccccccHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccccEEEEccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHcccccccccccHHHcccccHHHEEEccccccHHHccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEcccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHccccccccccccHHHccccccEEccEEEcccccccccHHHHHHHHHHHHHcccccccccccccHHHcccccccEEEEEccccccccHHHHccccccEEEEEEEccccccccccccHHHccHHHHHHccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHccccEEEEccccccccHHHHHHHHccccHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccHHccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHcccHHHHHccccHHcccccccccccccEEEcccccccHHHHHHHHHHHHHHHccccEEcccEEEcccHHHHHHHHHHHHHHHHcccccHHHHHHHcHHHHcccccccccccEEEEEEEEEEHHHHHHHcccccEEEEEEcccccccccccccEEEEcccccccccccccEEEccHHEEcccccEEEEEcccccEEEEEccccEEEEEccccHHHHHHcccEEEEEcccHHHHcccccccEEEEEcccccHHHHccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHEEHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccc //