[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : gntZ
DDBJ      :gntZ         6-phosphogluconate dehydrogenase, decarboxylating
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  603/915 : Eukaryota  187/199 : Viruses  0/175   --->[See Alignment]
a.100.1c.2.1
:476 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->469 2w90B PDBj e-122 49.1 %
:RPS:PDB   8->158 2d5cA PDBj 7e-16 19.7 %
:RPS:PDB   139->434 1cb8A PDBj 4e-59 8.0 %
:RPS:SCOP  5->180 1pgjA2  c.2.1.6 * 1e-21 42.5 %
:RPS:SCOP  178->469 1pgjA1  a.100.1.1 * 6e-96 30.9 %
:HMM:SCOP  4->178 1pgpA2 c.2.1.6 * 1.5e-49 41.4 %
:HMM:SCOP  178->475 1pgpA1 a.100.1.1 * 7.2e-132 56.6 %
:RPS:PFM   5->163 PF03446 * NAD_binding_2 3e-23 42.0 %
:RPS:PFM   180->469 PF00393 * 6PGD 4e-88 54.7 %
:HMM:PFM   180->469 PF00393 * 6PGD 2.8e-123 56.1 289/291  
:HMM:PFM   4->175 PF03446 * NAD_binding_2 1.3e-52 45.9 157/163  
:BLT:SWISS 1->469 6PGD2_BACSU e-117 47.0 %
:PROS 255->267|PS00461|6PGD
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87317.1 GT:GENE gntZ GT:PRODUCT 6-phosphogluconate dehydrogenase, decarboxylating GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1517611..1519041) GB:FROM 1517611 GB:TO 1519041 GB:DIRECTION - GB:GENE gntZ GB:PRODUCT 6-phosphogluconate dehydrogenase, decarboxylating GB:PROTEIN_ID AAK87317.1 GB:DB_XREF GI:15156614 GB:GENE:GENE gntZ LENGTH 476 SQ:AASEQ MEQAEIGLIGLGVMGSNLALNIAEKGNKIAVFNRTPEVTRKFYADAGELQGQIIPCETIEEFVAAIRPPRPIIIMIKAGDPVDQQMEILKPHLANGDIMIDAGNANFRDTIRRFDNLKDSGLTFIGMGVSGGEEGARHGPSIMVGGTEDSWKRVEKVLTSISAKYNDDPCVAWLGNDGAGHFVKTIHNGIEYADMQMIAEIYGILRDGLKMSAVEIADVFAEWNKGRLNSYLIEITEKVLRAADPITGKPMVDLILDKAGQKGTGKWSVIEAQNMGVAATAIEAAVAARILSSQKDEREAAEKIFGLPTLAAAPADKKAFIADLESALLAAKVGAYAQGFAIMSAASKEFNWNLPMPTIARIWRAGCIIRSEFLDEITSAFTKDPHVANLIVTPAFSAIVKDTDAPLRRVVSYAVLSGLPVSALASALGYFDAYRRGRGSANLIQAQRDFFGAHGFERTDGVDKPHGPWGSGADIF GT:EXON 1|1-476:0| BL:SWS:NREP 1 BL:SWS:REP 1->469|6PGD2_BACSU|e-117|47.0|466/469| PROS 255->267|PS00461|6PGD|PDOC00390| SEG 66->76|irpprpiiimi| SEG 278->288|aataieaavaa| SEG 311->323|aaapadkkafiad| BL:PDB:NREP 1 BL:PDB:REP 1->469|2w90B|e-122|49.1|466/471| RP:PDB:NREP 2 RP:PDB:REP 8->158|2d5cA|7e-16|19.7|137/261| RP:PDB:REP 139->434|1cb8A|4e-59|8.0|287/674| RP:PFM:NREP 2 RP:PFM:REP 5->163|PF03446|3e-23|42.0|150/160|NAD_binding_2| RP:PFM:REP 180->469|PF00393|4e-88|54.7|289/290|6PGD| HM:PFM:NREP 2 HM:PFM:REP 180->469|PF00393|2.8e-123|56.1|289/291|6PGD| HM:PFM:REP 4->175|PF03446|1.3e-52|45.9|157/163|NAD_binding_2| GO:PFM:NREP 7 GO:PFM GO:0004616|"GO:phosphogluconate dehydrogenase (decarboxylating) activity"|PF03446|IPR006115| GO:PFM GO:0006098|"GO:pentose-phosphate shunt"|PF03446|IPR006115| GO:PFM GO:0055114|"GO:oxidation reduction"|PF03446|IPR006115| GO:PFM GO:0004616|"GO:phosphogluconate dehydrogenase (decarboxylating) activity"|PF00393|IPR006114| GO:PFM GO:0006098|"GO:pentose-phosphate shunt"|PF00393|IPR006114| GO:PFM GO:0050661|"GO:NADP or NADPH binding"|PF00393|IPR006114| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00393|IPR006114| RP:SCP:NREP 2 RP:SCP:REP 5->180|1pgjA2|1e-21|42.5|174/178|c.2.1.6| RP:SCP:REP 178->469|1pgjA1|6e-96|30.9|288/300|a.100.1.1| HM:SCP:REP 4->178|1pgpA2|1.5e-49|41.4|174/0|c.2.1.6|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 178->475|1pgpA1|7.2e-132|56.6|297/0|a.100.1.1|1/1|6-phosphogluconate dehydrogenase C-terminal domain-like| OP:NHOMO 1062 OP:NHOMOORG 797 OP:PATTERN ------------------------11111-11------------------------------------ 1121311111111122222-2211232222222222226311112212122221311211221122233212111211----111---1111-1-------1--111112111111111111111111111111-142211---112111111111111111111112131111111111111111--11-2212222222212222221222132221111212111111122111111111221111111121212211111221122212222222-------1--11111111111-------------121---1111-1--1-------1-----------1----------1---1--1332------11112-----1-1121111111111111111111-1111211112-1222222122211------11-------1111111111111------------------------------------1------1111111111-22211111-1113---------------1-12---11311-11111111121--1-1---111-1---------1--11111112---------------------------11---2-11111211111111111111111121111--111111111111111111111111-1111111111111111111111111111111111111111111111111111-111111111111111----------2--11111111111111111-----------1----1111-1111-111---------1111111111112111111111111--------------11111111-12--------1------------------1--1111111- 11--111-311111122212222222222111122221111111211211131311111222111111-1111112224311111111-2412121112211122311-12111112111111115131281--13111111121111--1111-11-211121131121211216111H1111162481522211111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 469 STR:RPRED 98.5 SQ:SECSTR ccccEEEEEcccTTHHHHHHHHHHTTcEEEEEcccHHHHHHHHTTTcEEEEcHHEcccHHHHHHHccEEEEccccHHHHHHHHTcTTcHHHHccTTcEEEEcccccHHHHHHHHHHHHHTTcEEEEccEEcHHHHHHHHHHHHHHHHHHHccccTTHHHHHHHHHHHcTTcccTTccTTcccccccTTHHHHHHHHHHHHHHHcTTcTTTTcHHHHHHHHHHHHTHHHHHHHHHHHHHGGGcccccccHHHHHHHHHTTccccGGGccHHHHHHHHHHHTTccHHHHHHHHTTcHHHHHHHHHTccEEccccEEETTccEEcccccccTTTHHHHHHHHHHHHHHHHTTcTTcccHHHHHHHHETTEEcGGGcGGGGGcTTTTcccGGGHHHHHHHHHHcGGGHHHHHHHHHHHTTcccTTTTcccEEEEETTTTcccEEHHHHHHcccEEccccEEEEcTTccEEEEE####### PSIPRED ccccEEEEEEccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccccccHHHHccHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHccccEEccccccccHHcccccEEEEcccHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccEEEccccccccccccccccccc //