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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : gp34
DDBJ      :gp34         phage head portal protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  103/915 : Eukaryota  0/199 : Viruses  5/175   --->[See Alignment]
:388 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   52->387 PF04860 * Phage_portal 5e-49 38.4 %
:HMM:PFM   40->386 PF04860 * Phage_portal 3.3e-85 39.6 336/347  
:BLT:SWISS 51->387 Y759_RICBR 1e-59 35.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86760.1 GT:GENE gp34 GT:PRODUCT phage head portal protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 943700..944866 GB:FROM 943700 GB:TO 944866 GB:DIRECTION + GB:GENE gp34 GB:PRODUCT phage head portal protein GB:PROTEIN_ID AAK86760.1 GB:DB_XREF GI:15155958 GB:GENE:GENE gp34 LENGTH 388 SQ:AASEQ MRFPFSLPWLRPADGKAVPESRKMAEGFMAVAVQGGPAFWSGRSYAALAREGFMKNPVAHRAARMVAETSAAVSWLIYDGDEELADHPLLALLSQPSAHMGGPDFFEALYGHLMLSGNAYIEPLMIGGRLRELHLLRPDRVSIVEGPDGWPVAYEYRAEGRAARRIAAERDGLGLLHLKLFHPLDDRVGFAPLASAGAALDLHNAASHWNKRLLDNSARPSGALVYQPKEGGNLSTEQYDRLKRELEEGYQGAMNAGRPLLLEGGLDWKAMGLSPRDMDFLEARNGAARDIALSLGVPPMLIGIPGDNTYANYQEANRAFYRLTVLPLVYRTAARLCGWLAPVFGAGLRLEPDLDRIAGLAGERDALWTRIGAASFLSDEEKREAVGY GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 51->387|Y759_RICBR|1e-59|35.8|335/385| SEG 153->186|ayeyraegraarriaaerdglgllhlklfhpldd| RP:PFM:NREP 1 RP:PFM:REP 52->387|PF04860|5e-49|38.4|328/340|Phage_portal| HM:PFM:NREP 1 HM:PFM:REP 40->386|PF04860|3.3e-85|39.6|336/347|Phage_portal| OP:NHOMO 116 OP:NHOMOORG 108 OP:PATTERN -------------------------------------------------------------------- ------------------------------------11---------------------------------------------------------------------------------------------------------1----------------------------------------------1------------1---1------------------------------------------------------------------------1-----------------------1-------------------1-----------------------2-----1-----------1---------111-----------1111111111111111111-11-11-11--1--111--------121-11112121121----------------112111111111--11--1------1-11-11-1----------1-----------1---------------1-----------------------------------------------------------------------------------------------------------------------------------------------11--1-1-------2-1-1--11-----1--------1---11--------------1121-----------------------------1--1----------------------------------1--1------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------1-------------------------------------------------1--------------------------------------------1-1--1---------------------- DISOP:02AL 15-24, 247-255| PSIPRED cccccccccccccccccccccHHHccccccEEccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEccEEccccHHHHHHHcccccccHHHHHHHHHHHHHHcccEEEEEEEccccEEEEEEEcccEEEEEEcccccEEEEEEEEcccEEEEEccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccccEEEEEcHHHcccHHHHHHHHHHHHHcccccHHHHHHHHcc //