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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : hemB
DDBJ      :hemB         delta-aminolevulinic acid dehydratase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  749/915 : Eukaryota  180/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:337 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->334 1w1zA PDBj 1e-95 55.8 %
:RPS:PDB   15->332 1b4eA PDBj 5e-88 43.6 %
:RPS:SCOP  15->336 1aw5A  c.1.10.3 * e-118 34.3 %
:HMM:SCOP  11->337 1b4eA_ c.1.10.3 * 5.4e-131 51.4 %
:RPS:PFM   15->334 PF00490 * ALAD e-104 58.6 %
:HMM:PFM   14->333 PF00490 * ALAD 1.6e-136 51.7 319/324  
:BLT:SWISS 16->334 HEM2_BRAJA e-106 58.0 %
:PROS 253->265|PS00169|D_ALA_DEHYDRATASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86965.2 GT:GENE hemB GT:PRODUCT delta-aminolevulinic acid dehydratase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1155681..1156694) GB:FROM 1155681 GB:TO 1156694 GB:DIRECTION - GB:GENE hemB GB:PRODUCT delta-aminolevulinic acid dehydratase GB:PROTEIN_ID AAK86965.2 GB:DB_XREF GI:159139941 GB:GENE:GENE hemB LENGTH 337 SQ:AASEQ MQDKTHLVDEITGHRRMRRNRKADWTRRLVQENRLTVDDLIWPVFIVPGSNIVEPIPAMPGVNRMSVDRLVEAAKEAADLGIPAIATFPNIEMELRDETGSNALEANNLINQATIAVKKAVPNIGMITDVALDPFTSHGHDGILRGDEIVNDETVEQVVTAAILQAEAGSDIISPSEMMDGRIGAIRRGLDAAGHQNVGIMAYATKFSSGYYGPYREAISTAGLLKGDKNSYYISPANGMEAIRDAALDVEEGADMLMVKPGLPYLDICWRLKENFGLPTFAYQVSGEYTQIKAAAMNGWIDGERVMMETLLCFKRAGCDGILTYFAIEAARKLAKH GT:EXON 1|1-337:0| BL:SWS:NREP 1 BL:SWS:REP 16->334|HEM2_BRAJA|e-106|58.0|319/353| PROS 253->265|PS00169|D_ALA_DEHYDRATASE|PDOC00153| BL:PDB:NREP 1 BL:PDB:REP 29->334|1w1zA|1e-95|55.8|303/319| RP:PDB:NREP 1 RP:PDB:REP 15->332|1b4eA|5e-88|43.6|314/323| RP:PFM:NREP 1 RP:PFM:REP 15->334|PF00490|e-104|58.6|319/323|ALAD| HM:PFM:NREP 1 HM:PFM:REP 14->333|PF00490|1.6e-136|51.7|319/324|ALAD| GO:PFM:NREP 3 GO:PFM GO:0004655|"GO:porphobilinogen synthase activity"|PF00490|IPR001731| GO:PFM GO:0033014|"GO:tetrapyrrole biosynthetic process"|PF00490|IPR001731| GO:PFM GO:0046872|"GO:metal ion binding"|PF00490|IPR001731| RP:SCP:NREP 1 RP:SCP:REP 15->336|1aw5A|e-118|34.3|306/326|c.1.10.3| HM:SCP:REP 11->337|1b4eA_|5.4e-131|51.4|323/0|c.1.10.3|1/1|Aldolase| OP:NHOMO 1081 OP:NHOMOORG 985 OP:PATTERN 11-1-11111111111-1111111111111111111111111111111111111-------111--11 1111111111111111111-111111111111111111111111111111111111111111111111111--------111111111----1------111111111111111111111111111111111111111111---11232122211111111112111321111111111111111111---11111111111111111111221111111111111111111111111111111111111111-------------11---------------------------------------------1---------11111111111111111111111211---1-11111111-11111-1-111111111-----111111111211211111111111-1121111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111222221122221211211--11111------21111111111111111-11111111111111111111121111111111111111111111111111111111111111111--1111111111111212111111-----11111111121111111111122212111111111111111111111111111111111111111111111111-111111---------------------------------------11-----111 11--111-1---11111111111-1121111113211111111111111111111111111111-11111111111111111111111-12111111111111211-12-2121211111111122111382-12311111111--111-11-111211221121111111--121111K111112133121112111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 337 STR:RPRED 100.0 SQ:SECSTR HHHHcEEEEEEETTccGGGGcccHHHHHHHccccccGGGEEEEEEEEccccccEEcTTcTTcEEEEGGGHHHHHHHHHHTTccEEEEEEEcccGGccTTcGGGGcTTcHHHHHHHHHHHHcTTcEEEEEEccTTTccccccccEETTEEcHHHHHHHHHHHHHHHHHHTccEEEEccccTTHHHHHHHHHHHTTcTTcEEccccEEcccGGGHHHHHHHccccHTccccTTTcccTTcHHHHHHHHHHHHHTTcccEEEEccGGGHHHHHHHHHHccccEEEEccHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHTTccEEEcTTHHHHHHHHHcH DISOP:02AL 1-4,8-10,337-338| PSIPRED ccccccccccccccccHHHHHccHHHHHHHHcccccHHHEEEEEEEEcccccEEEcccccccEEccHHHHHHHHHHHHHccccEEEEEccccHHHcccHHHHHcccccHHHHHHHHHHHHcccEEEEEEEcccccccccccEEEEccEEccHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHcc //