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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ileS
DDBJ      :ileS         isoleucyl-tRNA synthetase
Swiss-Prot:SYI_AGRT5    RecName: Full=Isoleucyl-tRNA synthetase;         EC=6.1.1.5;AltName: Full=Isoleucine--tRNA ligase;         Short=IleRS;

Homologs  Archaea  68/68 : Bacteria  911/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
a.128.1a.27.1b.51.1c.26.1
:967 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->945 1ffyA PDBj e-177 41.9 %
:RPS:PDB   24->887 2bteA PDBj e-106 17.6 %
:RPS:PDB   861->952 2ahiC PDBj 1e-16 13.5 %
:RPS:SCOP  12->227 1n1bA2  a.128.1.3 * 6e-41 10.8 %
:RPS:SCOP  212->437 1ffyA2  b.51.1.1 * 1e-39 36.5 %
:RPS:SCOP  412->685 1ileA3  c.26.1.1 * 3e-34 23.8 %
:RPS:SCOP  691->952 1ffyA1  a.27.1.1 * 1e-64 35.2 %
:HMM:SCOP  8->690 1ffyA3 c.26.1.1 * 1.5e-128 37.6 %
:HMM:SCOP  691->964 1ffyA1 a.27.1.1 * 8.5e-59 32.3 %
:RPS:PFM   36->680 PF00133 * tRNA-synt_1 e-127 45.6 %
:RPS:PFM   722->870 PF08264 * Anticodon_1 8e-17 37.8 %
:HMM:PFM   35->679 PF00133 * tRNA-synt_1 3.5e-183 38.9 588/601  
:HMM:PFM   723->871 PF08264 * Anticodon_1 6.6e-28 32.6 141/152  
:BLT:SWISS 1->953 SYI_AGRT5 0.0 100.0 %
:PROS 64->75|PS00178|AA_TRNA_LIGASE_I
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86495.1 GT:GENE ileS GT:PRODUCT isoleucyl-tRNA synthetase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 680863..683766 GB:FROM 680863 GB:TO 683766 GB:DIRECTION + GB:GENE ileS GB:PRODUCT isoleucyl-tRNA synthetase GB:PROTEIN_ID AAK86495.1 GB:DB_XREF GI:15155647 GB:GENE:GENE ileS LENGTH 967 SQ:AASEQ MSDTAEKLDYSTTLYLPQTDFPMRAGLPQKEPETVKRWQDMGLYKKLRASAAGREKFVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGFDANYVPGWDCHGLPIEWKIEEAYRARGKNKDEVPVNEFRKECRDFAAGWIKVQSEEFKRLGIEGDFENPYTTMNFHAEARIAGELLKIARSGQLYRGSKPIMWSVVERTALAEAEVEYHDVESDMIWVKFPVKDAAPALSGVSVVIWTTTPWTIPGNRAIAFSSRVEYGLFEVESAQNDFGPQTGEKLIFARKLADEAAAKAKLTFKFVRDVKSEELAAITCAHPLASLGYDFPVPLLDGDHVTDDAGTGFVHTAPSHGREDFDAWTNSVRTLEARGIDTKIPFPVDDAGFYTEDAPGFGPSAEGGAARVMDDNGKKGDANERVIKALIAANNLFARGRLKHSYPHSWRSKKPVIFRNTPQWFVYMDKELGDGTTLRSRSLDAIDQTRFVPASGQNRLRAMIEGRPDWVLSRQRSWGVPIAVFADEQGEVLVDEAVNARILEAFEAEGADAWFAEGAKERFLGNDHDHAKWQQVMDILDVWFDSGCTHTFTLEDRPDMKWPADVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVVTHGFTMDEQGRKQSKSLGNVVAPQDVMKESGADILRLWVMTTDYWEDQRLGKAIIQTNIDAYRKLRNTVRWMLGTLAHDNGEEIAYADLPELEKLVLHRLSELDKVVRDGYDAFDFKKITRALIDFANVELSAFYFDIRKDTLYCDAPSSLKRRASLSVIAKLFDCLVTWLAPMLPFTTEEAWLSRYPDAESVHLAQFPEIPAEWKNDALEAKWEKIRKVRTVVTGALEVERREKRIGSSLEAAPVVHIADSDLLAALSGQDFAEICITSAITVVGDEGPADGFRLQEVAKVVVEQKLAEGVKCARSWRITTDVGSDPQYPDVSARDAAALRELAALK GT:EXON 1|1-967:0| SW:ID SYI_AGRT5 SW:DE RecName: Full=Isoleucyl-tRNA synthetase; EC=6.1.1.5;AltName: Full=Isoleucine--tRNA ligase; Short=IleRS; SW:GN Name=ileS; OrderedLocusNames=Atu0686; ORFNames=AGR_C_1230; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->953|SYI_AGRT5|0.0|100.0|953/967| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 64->75|PS00178|AA_TRNA_LIGASE_I|PDOC00161| SEG 284->296|arkladeaaakak| SEG 954->966|ardaaalrelaal| BL:PDB:NREP 1 BL:PDB:REP 8->945|1ffyA|e-177|41.9|880/917| RP:PDB:NREP 2 RP:PDB:REP 24->887|2bteA|e-106|17.6|792/876| RP:PDB:REP 861->952|2ahiC|1e-16|13.5|89/193| RP:PFM:NREP 2 RP:PFM:REP 36->680|PF00133|e-127|45.6|577/593|tRNA-synt_1| RP:PFM:REP 722->870|PF08264|8e-17|37.8|143/153|Anticodon_1| HM:PFM:NREP 2 HM:PFM:REP 35->679|PF00133|3.5e-183|38.9|588/601|tRNA-synt_1| HM:PFM:REP 723->871|PF08264|6.6e-28|32.6|141/152|Anticodon_1| GO:PFM:NREP 12 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00133|IPR002300| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00133|IPR002300| GO:PFM GO:0005524|"GO:ATP binding"|PF00133|IPR002300| GO:PFM GO:0005737|"GO:cytoplasm"|PF00133|IPR002300| GO:PFM GO:0006412|"GO:translation"|PF00133|IPR002300| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00133|IPR002300| GO:PFM GO:0000166|"GO:nucleotide binding"|PF08264|IPR013155| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF08264|IPR013155| GO:PFM GO:0005524|"GO:ATP binding"|PF08264|IPR013155| GO:PFM GO:0005737|"GO:cytoplasm"|PF08264|IPR013155| GO:PFM GO:0006412|"GO:translation"|PF08264|IPR013155| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF08264|IPR013155| RP:SCP:NREP 4 RP:SCP:REP 12->227|1n1bA2|6e-41|10.8|212/315|a.128.1.3| RP:SCP:REP 212->437|1ffyA2|1e-39|36.5|189/194|b.51.1.1| RP:SCP:REP 412->685|1ileA3|3e-34|23.8|268/452|c.26.1.1| RP:SCP:REP 691->952|1ffyA1|1e-64|35.2|256/273|a.27.1.1| HM:SCP:REP 8->690|1ffyA3|1.5e-128|37.6|447/451|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 691->964|1ffyA1|8.5e-59|32.3|266/273|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases| OP:NHOMO 3189 OP:NHOMOORG 1176 OP:PATTERN 33222232122222223333323232233332222222322223322223333333333333323322 3232222222222222222-22222222222222222222222223222332333333223332222222222222222333242333222222222122222222222222222222222222223323223333222332223322233333333333233333333333332333232332332233223233333333233333332223233322224223332323322222222232222222222233222232223322223332322222222222222222222222222222222222222222222222223222222222232323222222223223222333222233332222323222333333333323333323322333333333333122222223333333333333333333333323333332333333333323224232222222222222222222222222222232332322222222222344442222555532222222222222223223323332222222222322233223322332332223233322232222232332353232222222222222232222222222222222232322222222222222222222222-2223222222223222222222222222-22222222222222222222222222222222222222222222222222221222222222222222222222333333233222222221222222222222222222222222222222222222333323332222222222222222222222222222222323322332222222222223322-23232222222222323332222332333222 4522454-72222223343333433343333334443444344333433432323334333333333314333333313333333344-3433333333333344423A47464638344234464474nz51644443484363244325215433336CG55463745874444344f4444447BC4555466844 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 952 STR:RPRED 98.4 SQ:SECSTR EETTEEEEEccEEEEEEEEEEEEcccHHHHHHHHHHHHHHHTcccccccccHTTcEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHTTcEEEcccccccccHHHHHHHHHEccTTTTHHHHTTTTHTTccHHHHHHHHHHHHHHHHHHTTccccGGGcccTTcHHHHHHHHHHHHHHHHTTcEEEEEEEEEEETTTTEEEcGGGcTTcEEEEEEEEEcGGGGHHHHHccccEEEEEEccGGGGGGccEEEEcTTcTHHHHcccHHHHHHHHHHHHHHHHTcHHHHHHHHHHHcccHHHHTTcTTccccEEEEEEEEcTTTccEEEEEEcTTccTTcTTcEEEEcGGGcHHHHHHHHHccEEccccccccccccccccccEEcccGGGTTccHHHHHHHHHHTTcHHHHHHHHHHHHHHHHTcEEEEEEccccccccEEcccccHHccccEEEETTHHTTTEEEEcccTTccccccccccHHHHccccccGGGGcHHHHEEEccccccEEETTHHHHTTcTTcccccccHHHHHHHccccEEEEEcGGGTTTHHHHHHHHHHHHHHTTcccccccccccEEcccEEEcEETTEEEccHHHHHHHcccccEEEHHHHHHTTcEEEEcTTccEEEEEcccccTTTTccccHHHHHHHccHHHHHHHHHcccTTccEEEcHHHHHHHHHHHHHHHHHHHHTHHHHHHTcccccccTTccTHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccGGGHHHHHHHHTTTcHHHHHHHHHHHTTccccGGGTccccccHHHHcccEEEEEEETTEEEEEEEEcccccHHHHHHHHTTccccHHHHHcccccEEEHHHTcHHHHHHHHHHHHcTHHTHHHHHHHHHHHHHHHHHHHTcccccTTTccccccccccccccc############### DISOP:02AL 1-12, 861-868| PSIPRED cccccccccHHHHcccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccEEccccccccccHHHHHHHHHHHHHHHHcccEEEccEEEEEcccccccccHHHHccccccccEEEEEEEEEcccccccccEEEEccccHHHHHcccEEEEcccccEEEEEEEcccccEEccccEEEEEHHHHHHHHHHHccccEEEEEcccccEEEcEEEEccccccccccEEEEEEccccccccccEEEEEcccccHHHHHHHHHccccccEEEcccccccEEccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEccEEEEcEEEccccccEEEEccccEEEcccHHHccHHHHHHHHHHHHHccEEEEcHHHHHHHHHHHcccccEEEEEccccEEccccccccccEEcccccHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEEcccccHHHHccccccccccEEEEEEEEHHHHHHHHHHHHHHHHHcccccHHHEEEEEEEEcccccEEHHcccccccHHHHHHHccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHHHHcccHHHHHHHHHEEEEccccccccEEccccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHcc //